Gene Dshi_2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2286 
Symbol 
ID5713940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2414815 
End bp2415318 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID641268209 
Producthypothetical protein 
Protein accessionYP_001533623 
Protein GI159044829 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC TGCCGAAATC GACGGAACGG CCGTCCGTTC ACCCCGAGAT CGCGGACATC 
ACCGACGCGC TCAGCTTCAA GGTCGCGCGG TTGAACGCGA TCAACGACCG GGCCGGGAGC
TATCATTACA AGCTCAACCA TAACGTCACG CTGAATCAGT GGCGGATCCT TGGGCTCGTG
TCCGCCTTCG GGCCAGTTCC CTCACGGGAA GTGCGCGAAA GGCTTTACAT GGATAAGGGG
CAGTTCAGTC GGATCGTCAA TCAATTGGTG GATCGGGGCC TGATCCACAC AAGACCTCTT
GCATCGAATG CGAGCGCGCT CGCGCTGGAT CTGACCAGCG CGGGGCGCAA GCTGCACGAT
GTGTTGATCC GGTTCACCGC TGAGCGGAAC GCGGTGACCG CGTCGGTGTT AACGGCGAGC
GAATGCGAAA CCTTGCTGCG CCTGCTCGAC AAGGTTGGCG ATCATGCCCA TGCCCTGCTC
ATGGAGCGGC AGCGCGAAGG ATGA
 
Protein sequence
MIPLPKSTER PSVHPEIADI TDALSFKVAR LNAINDRAGS YHYKLNHNVT LNQWRILGLV 
SAFGPVPSRE VRERLYMDKG QFSRIVNQLV DRGLIHTRPL ASNASALALD LTSAGRKLHD
VLIRFTAERN AVTASVLTAS ECETLLRLLD KVGDHAHALL MERQREG