| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2279 |
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| Symbol | |
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| ID | 5713933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2405034 |
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| End bp | 2405738 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268202 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001533616 |
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| Protein GI | 159044822 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.957974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC ACATACTCAT TGTCGAAGAT GACCGCACGA CTCGGATGCG CCTTGCCGCG
TATCTGAGGG AACAGGGTTA CCGTGTCAGC GAAGCCGAGA ACGCCGAACA GATGGAGCAG
ACCCTTCACG ACGACCCGGC TGAACTCTTG CTGGTGGACA TCAATCTCGA CGGAAAGGAC
GGGCTGACCA TCACGCGGGA GCAACGGGCC GTGTCCCGCG TCGGGATCAT CCTTCTGACC
GCCCGAGACG ATCAGGTGGA CAAGATCGTC GGGTTGGAGA TGGGAGCCGA CGATTATGTG
ACGAAGCCTT TCGACAAGCG CGAACTGGCG GCGCGGGTCA AGAACCTGCT GGCACGGATT
ACCGATATCG GTCAGGCCCC ACAGGGCGCG CACGCCGTTC ACGATTTCGG GCCCTGGCGT
TTCGACCGCA TACGCCGCAG GCTGATCTCG GCAGCCCGCA TCGAGCCCCT GTCAAAGCAG
GAATTCGATG TAATGACGGC CTTGGCCGAC CACCCCGGCC AAACCCTCAG CCGCGCGCGA
ATTGCCGAGA TGATCGGACG ACCCGCGGGG CGCGGAAACA ATCGCATGAT CGATGTCGTC
GTCGGGCGCC TGCGAAAAAA GGTGGAAAAG GATCCCGCGA GGCCGGAATG GATTCTGACC
GAACACGGCA AGGGTTACCA GTTCGTCGAT CCGGCCGCGC TCTGA
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| Protein sequence | MTGHILIVED DRTTRMRLAA YLREQGYRVS EAENAEQMEQ TLHDDPAELL LVDINLDGKD
GLTITREQRA VSRVGIILLT ARDDQVDKIV GLEMGADDYV TKPFDKRELA ARVKNLLARI
TDIGQAPQGA HAVHDFGPWR FDRIRRRLIS AARIEPLSKQ EFDVMTALAD HPGQTLSRAR
IAEMIGRPAG RGNNRMIDVV VGRLRKKVEK DPARPEWILT EHGKGYQFVD PAAL
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