Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2250 |
Symbol | ribH |
ID | 5713903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2371011 |
End bp | 2371562 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641268172 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_001533587 |
Protein GI | 159044793 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.574068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCAAG CCGAGACACA TCATGAATTG CCACTGCCGC GCTTCGAAAA GCCGGTGAAA GTGCTGATCG TCCAGTCCCC CTATTACAAG GATATCGCCG ACGGGTTGCT GACCGGCGCG AAAGCCGTGC TCGAAGCGGC TGGCGCCAGC TTCGAGGTGG TGCATGTGCC CGGCGCACTG GAAATCCCGC CCGCCATTCG GATTGCCCAT GTGCAGTCGA ACTTCGACGG GTACGTGGCG CTGGGGTGCG TGATCCGGGG CGAGACGAGC CATTACGAGA CCGTCTGCAA CGACAGCTCC CACGGGCTTA TGCTGCTGGG GTTGCAGGGC GCGTGTCTGG GCAACGGGAT CCTCACGGTG GAAAACAAAG ACCAGGCGCT GGTGCGTGCC GATCCCGAAG GCCAGAACAA GGGCGGTGGG GCGGCGGCGG CCGCGCTGCA CCTGATCGCG CTGTCGCGCC GCTACGCGAC CCAGACGAAA GGCGTCGGGT TCAAGCCCCG CGGCGAGACC ATTCAGCTGG CGGATGGGGG CGAAAGCCCG AGCCGCGCAT GA
|
Protein sequence | MAQAETHHEL PLPRFEKPVK VLIVQSPYYK DIADGLLTGA KAVLEAAGAS FEVVHVPGAL EIPPAIRIAH VQSNFDGYVA LGCVIRGETS HYETVCNDSS HGLMLLGLQG ACLGNGILTV ENKDQALVRA DPEGQNKGGG AAAAALHLIA LSRRYATQTK GVGFKPRGET IQLADGGESP SRA
|
| |