| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2233 |
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| Symbol | phbC |
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| ID | 5713886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2355488 |
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| End bp | 2357302 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641268155 |
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| Product | poly-beta-hydroxybutyrate polymerase |
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| Protein accession | YP_001533570 |
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| Protein GI | 159044776 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTG AGTCGGGCGG GCGGGAAGTC GCAGGATTAG AAATGGGTGA AAATCTCGAA
AAACTGAATG CGAATGTTGC GAAAATGGAA GAGCTTTCGC AACGATTGGT CCGGGCCATC
TCTCAGCGGG AGGCGCATGA CCAGGGTCTT CAGGGGCCTG GAACCGACGT CTACATGAAG
GCCGCGAGCG CTTATGTGGC CGAGGTGCTC AACAATCCGG CCAAGCTGAT GGAGCACCAG
GTCCAGTACT GGGGCAAGAC GCTCAAGCAT GTGGTCGAAG CGCAACAAAT GCTGGCCAAG
GGTCAGCTGA AGGCGCCCCG TGACGAACAT GCGGGCGATC GCCGCTTCAA GAACCCGCTT
TGGGATACCC ACCCGTATTT CAACTTCGTC AAGCAACAAT ACCTGATTTC TGCGGAATCG
ATCGAGAAGG CGGTGGCCGA TCTCGACAAC CTGGAGCCCA ACGACAAGAA GCGGGTGGAG
TTCTTTTCCA AGCAGATCGT CGATCTGTTC TCGCCTGCGA ATTTCCTGTC CACCAATCCC
GATGCGCTCG AGAAAGCGGT GGAAACCAAC GGCGAGTCCC TGGTGCGCGG GCTGGAGAAT
CTGGTGCGCG ACATCGAATC CCATCAGGGC GAGCACCTCG TCACCCTGTC GGATCCGTCC
GCCTTCACCG TGGGCGAAAA CCTCGCCACG ACGGAAGGCT CGGTCGTCTA TCGCAACCGG
ATGATGGAAT TGATCCAGTA TGCGCCCAAG ACCGAGACCG TCTGCAAGAC GCCGCTGATC
CTGTTCCCGC CCTGGATCAA CAAGTTCTAC ATCCTCGACC TGAAGCCCAA GAACTCCCTG
ATCAACTGGA TCGTCGAGCA GGGCTATACG CTTTTCGTGG TCAGCTGGGT CAACCCGGAC
GAAACCTATG CCGATGTCAG CCTCGATACC TATGTCGAGG AAGGCTACAT GACCGCCATC
GAGGAAGTGA AGAAGATCAC CGGCGAGAAA CAGGTCAATG CCGTGGGTTA CTGCATCGCG
GGCACGACTC TGACCTCGGT TCTGGCTCTG ATGAACAAGC GCGGCGACAA GTCGGTGCGT
TCGGCGACCT TCTTCACCAC CATGACCGAT TTCGAGGATG CGGGCGAGAT GGCCGTGTTC
CTCGATGACG ATTTCGTCGA CGGGATCGAA CGCGAGGTCG CGAGCAAGGG CTACCTGCAT
TCGTTCTTCA TGTCGCGGAC CTTCTCCTAC CTGCGGGCGA ACGACCTGGT CTATGGCCCC
GCGATCCGCA GCTACATGAT GGGCGAGGCG CCGCCCGCCT TCGACCTTCT GCACTGGAAC
GGGGACAGCA CGAACCTGCC CGGCAAGATG GTGGTGCAGT ACCTGCGTGA CCTGTGCCAG
GGCAACAAGC TGGCCAAGGG CGAGTTCGAG CTGTGCGGCG AGGTGCTGTC GCTCAAGGAC
ATGAAGACAC CGGCTATGGC CATCGCTTGC GAGACCGACC ACATCGCCCA TTGGAAAGGC
AGCTTCAACG GCTTCAAGCA GTTCGGCAGT CGCGACAAGA CTTTCATCGT GTCGGAATCC
GGGCATATCG CCGGCATCGT CAATCCGCCG AGCAAGATGA AATACGGCCA CTATACCAAT
GACGGCCCGA TGGAAGATCC CGAGACCTGG CTGGCCTCGG CCGAGTATCA CGAGGGTTCC
TGGTGGCCGC GCTGGTCGGA ATGGCTCAAG CGCCGCTCCG GGGCGCAGGT CCCGGCCCGG
CAACCGGGCG ATGCGACTCA CCCAGCCCTC GCTGCGGCGC CAGGTGAATA CGTCGTTGCG
CGCGTAGATG GTTGA
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| Protein sequence | MTTESGGREV AGLEMGENLE KLNANVAKME ELSQRLVRAI SQREAHDQGL QGPGTDVYMK
AASAYVAEVL NNPAKLMEHQ VQYWGKTLKH VVEAQQMLAK GQLKAPRDEH AGDRRFKNPL
WDTHPYFNFV KQQYLISAES IEKAVADLDN LEPNDKKRVE FFSKQIVDLF SPANFLSTNP
DALEKAVETN GESLVRGLEN LVRDIESHQG EHLVTLSDPS AFTVGENLAT TEGSVVYRNR
MMELIQYAPK TETVCKTPLI LFPPWINKFY ILDLKPKNSL INWIVEQGYT LFVVSWVNPD
ETYADVSLDT YVEEGYMTAI EEVKKITGEK QVNAVGYCIA GTTLTSVLAL MNKRGDKSVR
SATFFTTMTD FEDAGEMAVF LDDDFVDGIE REVASKGYLH SFFMSRTFSY LRANDLVYGP
AIRSYMMGEA PPAFDLLHWN GDSTNLPGKM VVQYLRDLCQ GNKLAKGEFE LCGEVLSLKD
MKTPAMAIAC ETDHIAHWKG SFNGFKQFGS RDKTFIVSES GHIAGIVNPP SKMKYGHYTN
DGPMEDPETW LASAEYHEGS WWPRWSEWLK RRSGAQVPAR QPGDATHPAL AAAPGEYVVA
RVDG
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