Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2167 |
Symbol | |
ID | 5713163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2298277 |
End bp | 2298945 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641268089 |
Product | hypothetical protein |
Protein accession | YP_001533504 |
Protein GI | 159044710 |
COG category | [S] Function unknown |
COG ID | [COG5281] Phage-related minor tail protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATT ACGATGAGTT GGACGGGTTC GATGCCCGGA TGAACGAGCT GGAGCAGACG CTGGGCGATG CGGCGGCGGT TGCCGGGGCG TTCGATGCCG AGATGAGCCG CCTGCGCGAC AGCATGCTCT ACACCGAGCG GGAGGCGGCC TCCCTCGGGA GCAGCGTGGG CAGCGGCTTG CGTCGCGCGT TCGACGGGTT GGCCTTCGAG GGGCTGAAAC TGTCCGACGC GCTCAAGACG GTGGCGCAGT CGATGGTGGA CGCGGCCTAC AACACGGCGA TGTCGCCGGT GCAAAAGGCG GTGGGCGACA CGTTGGCGAC GGGTGTCAAT TCGCTGATGT CCGGTTTGTT CGGGTTTTCC CATGGGGGCA GCTTTTCGCA GGGTCGCGTG ATGCCGTTTG CCAAGGGCGG GGTCGTCACC TCGCCCACGA CTTTCCCGAT GAAGGGGGCC ACCGGGTTGA TGGGCGAGGC CGGGCCGGAG GCGATCATGC CGCTGGCGCG CGGTGCCGAT GGGCGGCTCG GCGTGCGGGC CGACGGGGCA GGGGGTGGGC GGCCGGTGCA GGTCGTGATC AACATCTCCA CCCCCGATGT GGAGAGCTTC CGCCGGTCCC GCAGCCAGTT GGCCGCGGAT ATGGGGCGCG CGCTGACGCT CGGCCAGAGA AACCGCTGA
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Protein sequence | MSDYDELDGF DARMNELEQT LGDAAAVAGA FDAEMSRLRD SMLYTEREAA SLGSSVGSGL RRAFDGLAFE GLKLSDALKT VAQSMVDAAY NTAMSPVQKA VGDTLATGVN SLMSGLFGFS HGGSFSQGRV MPFAKGGVVT SPTTFPMKGA TGLMGEAGPE AIMPLARGAD GRLGVRADGA GGGRPVQVVI NISTPDVESF RRSRSQLAAD MGRALTLGQR NR
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