Gene Dshi_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2167 
Symbol 
ID5713163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2298277 
End bp2298945 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID641268089 
Producthypothetical protein 
Protein accessionYP_001533504 
Protein GI159044710 
COG category[S] Function unknown 
COG ID[COG5281] Phage-related minor tail protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATT ACGATGAGTT GGACGGGTTC GATGCCCGGA TGAACGAGCT GGAGCAGACG 
CTGGGCGATG CGGCGGCGGT TGCCGGGGCG TTCGATGCCG AGATGAGCCG CCTGCGCGAC
AGCATGCTCT ACACCGAGCG GGAGGCGGCC TCCCTCGGGA GCAGCGTGGG CAGCGGCTTG
CGTCGCGCGT TCGACGGGTT GGCCTTCGAG GGGCTGAAAC TGTCCGACGC GCTCAAGACG
GTGGCGCAGT CGATGGTGGA CGCGGCCTAC AACACGGCGA TGTCGCCGGT GCAAAAGGCG
GTGGGCGACA CGTTGGCGAC GGGTGTCAAT TCGCTGATGT CCGGTTTGTT CGGGTTTTCC
CATGGGGGCA GCTTTTCGCA GGGTCGCGTG ATGCCGTTTG CCAAGGGCGG GGTCGTCACC
TCGCCCACGA CTTTCCCGAT GAAGGGGGCC ACCGGGTTGA TGGGCGAGGC CGGGCCGGAG
GCGATCATGC CGCTGGCGCG CGGTGCCGAT GGGCGGCTCG GCGTGCGGGC CGACGGGGCA
GGGGGTGGGC GGCCGGTGCA GGTCGTGATC AACATCTCCA CCCCCGATGT GGAGAGCTTC
CGCCGGTCCC GCAGCCAGTT GGCCGCGGAT ATGGGGCGCG CGCTGACGCT CGGCCAGAGA
AACCGCTGA
 
Protein sequence
MSDYDELDGF DARMNELEQT LGDAAAVAGA FDAEMSRLRD SMLYTEREAA SLGSSVGSGL 
RRAFDGLAFE GLKLSDALKT VAQSMVDAAY NTAMSPVQKA VGDTLATGVN SLMSGLFGFS
HGGSFSQGRV MPFAKGGVVT SPTTFPMKGA TGLMGEAGPE AIMPLARGAD GRLGVRADGA
GGGRPVQVVI NISTPDVESF RRSRSQLAAD MGRALTLGQR NR