Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2149 |
Symbol | |
ID | 5713145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2278551 |
End bp | 2278991 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268071 |
Product | putative cupin |
Protein accession | YP_001533486 |
Protein GI | 159044692 |
COG category | [S] Function unknown |
COG ID | [COG3542] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.928679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG ACGAAATCAT CCGCCGCCTG GACCTTGCCC CCCATCCCGA AGGAGGCTGG TACCGCCAGA CCTGGGTCGC CGAGGCGGCC CCGGGTGCCC GTCCTGCGGG CACTGCCATC TACTTCCTGC TCAAGACCGG GGAGCGAAGC CACTGGCACA AGGTGGACGC GACGGAGATC TGGCTCTGGC ATGGGGGCGC ACCGCTGGAC CTGTGGATCG CCGCGACCAA GGCCGGTCCA GCCCGGCATC ACCGGCTGTG CGCCGATCTG GACGCAGGTA GCCCACAGGC CATCGTGCCG CCGGACCACT GGCAAGCTGC GACAAGCACG GCCACCACTG CAGATGGGTG GAGCCTGGTG AGTTGCACCG TGTCACCGGG GTTCAGGTTC GAGGGCTTCA CCCTGGCGCC GGCAGGCTTC GACATTCCGC GCGCGCCCTA G
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Protein sequence | MTADEIIRRL DLAPHPEGGW YRQTWVAEAA PGARPAGTAI YFLLKTGERS HWHKVDATEI WLWHGGAPLD LWIAATKAGP ARHHRLCADL DAGSPQAIVP PDHWQAATST ATTADGWSLV SCTVSPGFRF EGFTLAPAGF DIPRAP
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