| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2113 |
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| Symbol | glyA |
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| ID | 5713109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2241420 |
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| End bp | 2242694 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268035 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001533450 |
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| Protein GI | 159044656 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.332542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGA CCCTGAACAC CGCGGGCATC TCCGACACCG CCATCGCCGA GGCGATCGGC
CACGAGCTCG ACCGCCAGCA GACCCAGATC GAACTGATCG CCTCCGAAAA CATCGTCAGC
GTCGATGTGC TGCGCGCCCA GGGCTCGGTT CTGACCAACA AATACGCCGA AGGCTACCCG
GGCCGCCGCT ACTATGGCGG GTGCGAGCAT GTCGACACGG TCGAACAGAT CGCGATCGAC
CGGGTGTGCG AGTTGTTCGG ATCCCGCTTC GCCAACGTGC AGGCGCATTC CGGCGCCCAG
GCCAACCAGG CGGTGTTTCT CGCCCTGCTC AAGCCCGGTG ACCGGATCAT GGGTCTCGAC
CTGGCCCATG GCGGCCACCT GACCCACGGC TCGCCGGTGA CCATGTCCGG CAAGTGGTTC
GACGTGGTCA GCTACGAGGT GTCGAGGGAC GATCACCTGA TCGACATGGA CAATGTCCGG
AAGGTCGCGC TGGACACCAA GCCCAAGCTG ATCGTCGCCG GGGCCTCGGC CTATCCGCGG
CACATGGATT TCGCGGCCTT CCGGGCGATT GCAGACGAGG TGGGCGCCTG GCTGATGGTG
GACATGGCCC ATTACGCGGG CCTGATCGCG GCGGGCGAAT ACCCCGACCC GGTGCCCCAC
GCCCATGTCG TGACCTCGAC CACGCACAAG ACCCTGCGCG GCCCGCGCGG CGGCATCATC
CTGACCAATG ACGAGGCGCT GGCCAAGAAG TTCAACTCCG CCGTGTTCCC CGGTAACCAG
GGCGGCCCGT TGATGCATGT CATCGCGGCC AAGGCGGTGG CCTTCGGCGA AGCGCTGGAG
CCGTCCTTCA AGCAATACGC CAAGGACGTG ATCGCCAACG CGCGCGCCCT GTCCGAGGTG
CTGGTTGCAG GCGGGCTGGG CGTGGTTTCG GGCGGCACGG ATTGCCACAT GGTCCTTGTG
GACCTGCGCC CCAAGGGTGT GACCGGCAAG GCCGCTGAGA ACGCGCTCGA ACGCGCAGGG
CTGACCTGCA ACAAGAACGC GATCCCGTTC GACCCGGAAA AGCCCTTCGT GACCTCCGGG
GTGCGGCTCG GCACCTCCGC GGGCACCACC CGTGGTTTCG GTGAGGCCGA GTTCCGCAAG
GTGGGCGCGC TTGTCCTGCG GGTGATCGAC GCGCTTGCCG AGAATGCCGA GGGCGACGCC
GCCGTCGAGG CCGCAGTGCT GGAAGAGGTG CGCGCCCTGT GTGCCGCGCA TCCGATCTAC
GCCGACGACG TGTAG
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| Protein sequence | MLKTLNTAGI SDTAIAEAIG HELDRQQTQI ELIASENIVS VDVLRAQGSV LTNKYAEGYP
GRRYYGGCEH VDTVEQIAID RVCELFGSRF ANVQAHSGAQ ANQAVFLALL KPGDRIMGLD
LAHGGHLTHG SPVTMSGKWF DVVSYEVSRD DHLIDMDNVR KVALDTKPKL IVAGASAYPR
HMDFAAFRAI ADEVGAWLMV DMAHYAGLIA AGEYPDPVPH AHVVTSTTHK TLRGPRGGII
LTNDEALAKK FNSAVFPGNQ GGPLMHVIAA KAVAFGEALE PSFKQYAKDV IANARALSEV
LVAGGLGVVS GGTDCHMVLV DLRPKGVTGK AAENALERAG LTCNKNAIPF DPEKPFVTSG
VRLGTSAGTT RGFGEAEFRK VGALVLRVID ALAENAEGDA AVEAAVLEEV RALCAAHPIY
ADDV
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