| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2060 |
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| Symbol | acnB |
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| ID | 5713055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2178310 |
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| End bp | 2181102 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267982 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_001533398 |
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| Protein GI | 159044604 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.313941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGT ACACAGCCTA TCTCGAAGAA ATCGCCGCGC GCAAGGAACA AGGCTTGCAA
CCCAAGCCCA TCGATGACGC CGCCCTGACG AGCGAAATCA TCGCCCAGAT CAAGGATCCC
GCGCATGAAC ATCGCGCGGA CTCGCTGCAA TTCTTCATCT ACAACACCCT GCCCGGCACC
ACGAGTGCGG CGGGGGCGAA GGCGCAATTC CTCAAGGAGA TCATCCTTGG CGAGTCGGTA
GTGGCCGAGA TCACGCCCGA TTTCGCCTTC GAGCTTCTGT CGCACATGCG CGGCGGGCCC
TCGGTCGAAG TGCTGCTCGA CATCGCACTC GGCGATGATG CCAGCCTCGC CGCCCAGGCG
GCGGAGGTCC TCAAGACCCA GGTGTTCCTC TATGAGGCCG ATACCGACCG GCTGAAAGCG
GCCCATGAGG CCGGCAACGC CGTGGCCACC GGCATCCTTC AAAGCTACGC CCGGGCGGAG
TTCTTCACCA CGCTGCCCGA GATCGAGGAC GAGATCGAGG TCGTGACCTA TATCGCCGCC
GAGGGCGATA TCTCCACCGA CTTGCTCTCC CCCGGCAACC AGGCACACTC GCGCTCGGAC
CGGGAACTGC ACGGCAAATG CATGATCTCC GAAGCCGCCC AGAAAGAGAT CGAGGCGCTG
AAGCTTCAAC ATCCGGGCAA GCGCGTCATG CTGATCGCCG AGAAGGGCAC CATGGGCGTG
GGCTCGTCGC GCATGTCCGG CGTGAACAAC GTGGCACTCT GGACCGGCAA ACAGGCCAGC
CCCTACGTGC CTTTCGTCAA CATCGCCCCC GTGGTCGCGG GCACCAACGG CATCTCCCCG
ATCTTCATGA CCACCGTCGG CGTGACCGGC GGGATCGGCA TTGATCTGAA GAACTGGGTG
AAGAAAGTCG ATGGCGACGG CAACCCGATC CTGAACAATG ACGGCAACCC GATTCTGGAG
CAGAAATACT CCGTCGACAC GGGCACCGTT TTGAAGATCG ACACCAAGGC GCGCAAGCTG
ATGAGCGCCG ATGGCGGCGA AGAGCTCGCG GATGTCTCCT CCGCGTTCAG CCCGCAGGCC
GTCGAGTTCA TGAAGGCCGG CGGCTCTTAT GCCGTGGTCT TCGGCAAGAA GCTGCAGACG
CTCGCCGCTG AAACGCTGGG CGTGGAGCCG ACGCCGGTCT TTGCCCCGGC CAAGGAAATT
TCCCATGAAG GCCAGGGCCT GACCGCCGTC GAAAAGATCT TCAACGCCAA TGCCCGCGGC
GTCACCCCGG GCAAGGTGCT CCATGCGGGC TCGGACGTGC GGGTGCAGGT CAATATCGTC
GGCTCCCAAG ACACCACCGG CCTGATGACC TCACAGGAGC TGGAAGCGAT GGCCGCCACG
GTGCTGTCGC CGACAGTGGA CGGGGCATAC CAGTCGGGCT GTCACACCGC CTCGGTCTGG
GACCTCAAGG CGCAAGCCAA CACCCCGCGC CTGATGGCGT TCATGCACAA GTTCGGGCTG
ATCACCGCGC GCGACCCCAA GGGCGTCTAT CACTCGATGA CCGACGTGAT CCACAAGGTC
CTGAACGACA TTACTGTCAG CGACTGGGAC ATCATCATCG GCGGCGACAG CCACACGCGC
ATGTCCAAGG GCGTGGCCTT CGGCGCCGAC AGCGGCACGG TGGCACTCGC ACTCGCCACG
GGCGAGGCGA CCATGCCGAT CCCGGAGTCG GTCAAGGTGA CCTTCAAGGG CAAGATGGCC
GATCACATGG ACTTCCGCGA CGTGGTCCAC GCCACCCAGG CGCAGATGCT GGCCCAGCAC
GGCGACAACG TTTTCCAGGG CCGGGTGATC GAGGTGCATA TCGGCACGCT GCTGGCGGAC
CAGGCCTTCA CCTTCACCGA CTGGACCGCC GAGATGAAGG CAAAGGCGTC GATCTGCATC
TCCAACGACG ACACGCTGAT CGAGTCCCTC GAAATCGCCA AGCAACGGAT CCAGGTGATG
ATCGACAAGG GCATGGACAA CGATGTGCAG ATGCTCGCCG GGCTGATCGC CAAGGCCAAT
GCGCGCATCG CCGAGATCCG GTCGGGCGAA AAGCCCGCCC TGAAACCCGA TGACACCGCC
CGGTACTTCG CCGAAGTGGT GGTGGACCTC GACCAGATCG TGGAGCCGAT GATCGCGGAC
CCGGATGTGC ACAACGCCGA TGTCTCGAAA CGCTACACCC ACGACACGAT CCGGCCGATT
TCCTATTACG GCGCGGAGAA GAAGATCGAC CTCGGCTTCG TGGGCTCCTG CATGGTGCAC
AAGGGCGACG TGAAGATCGT GGCCCAGATG CTGCGCAATC TCGAAAAGGC CAATGGCGAG
GTCAAGTTCA AGGCGCCGCT GGTGCTCGCC GCGCCGACCT ACAACATCAT CGACGAGTTG
AAGGAAGAGG GCGACTGGGA CGTGCTGCAG AAATACGCGG GCTTCGAGTT CGACGATTCC
GCGCCGAAGG AAAAGGCGCG CACGGAATAC GAGAATATCC TCTATCTCGA ACGTCCGGGC
TGCAACCTGT GCATGGGCAA CCAGGAGAAG GCGGCCAAGG GTGACACTGT CCTGGCAACC
TCCACCCGGC TGTTCCAGGG CCGCGTGGTG GCCGACAGCG AAACCAAGAA GGGCGAGTCC
CTGCTCGGCT CGACCCCGGT CGTGGTGCTC TCGGCGATCC TCGGGCGCAC CCCGACGGTC
GAGGAGTACA AGACAGCGGT CGAAGGGATC AACCTGACCA AGTTCGCCCC GCCCCTGACC
CCACCGATCG ACGCCAAGTC GGTCCACTTC TAG
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| Protein sequence | MSLYTAYLEE IAARKEQGLQ PKPIDDAALT SEIIAQIKDP AHEHRADSLQ FFIYNTLPGT
TSAAGAKAQF LKEIILGESV VAEITPDFAF ELLSHMRGGP SVEVLLDIAL GDDASLAAQA
AEVLKTQVFL YEADTDRLKA AHEAGNAVAT GILQSYARAE FFTTLPEIED EIEVVTYIAA
EGDISTDLLS PGNQAHSRSD RELHGKCMIS EAAQKEIEAL KLQHPGKRVM LIAEKGTMGV
GSSRMSGVNN VALWTGKQAS PYVPFVNIAP VVAGTNGISP IFMTTVGVTG GIGIDLKNWV
KKVDGDGNPI LNNDGNPILE QKYSVDTGTV LKIDTKARKL MSADGGEELA DVSSAFSPQA
VEFMKAGGSY AVVFGKKLQT LAAETLGVEP TPVFAPAKEI SHEGQGLTAV EKIFNANARG
VTPGKVLHAG SDVRVQVNIV GSQDTTGLMT SQELEAMAAT VLSPTVDGAY QSGCHTASVW
DLKAQANTPR LMAFMHKFGL ITARDPKGVY HSMTDVIHKV LNDITVSDWD IIIGGDSHTR
MSKGVAFGAD SGTVALALAT GEATMPIPES VKVTFKGKMA DHMDFRDVVH ATQAQMLAQH
GDNVFQGRVI EVHIGTLLAD QAFTFTDWTA EMKAKASICI SNDDTLIESL EIAKQRIQVM
IDKGMDNDVQ MLAGLIAKAN ARIAEIRSGE KPALKPDDTA RYFAEVVVDL DQIVEPMIAD
PDVHNADVSK RYTHDTIRPI SYYGAEKKID LGFVGSCMVH KGDVKIVAQM LRNLEKANGE
VKFKAPLVLA APTYNIIDEL KEEGDWDVLQ KYAGFEFDDS APKEKARTEY ENILYLERPG
CNLCMGNQEK AAKGDTVLAT STRLFQGRVV ADSETKKGES LLGSTPVVVL SAILGRTPTV
EEYKTAVEGI NLTKFAPPLT PPIDAKSVHF
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