| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2015 |
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| Symbol | ugpA4 |
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| ID | 5713010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2134480 |
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| End bp | 2135361 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641267939 |
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| Product | sn-glycerol-3-phosphate transport system permease protein |
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| Protein accession | YP_001533355 |
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| Protein GI | 159044561 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.960254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0166365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAGC GCGTGACGTT CAAGGGCTTG TGGCTGCCAC TGTTACTGGT GGCACCGCAG
ATCGTGATCA CGGCCCTGTT CTTCTTCTAT CCAGCCGGAC AGGCGATCTG GCAGTCGCTG
TTCATCCCGG ACCCTTTCGG GCTGTCGATG CAATGGGTGG GCCTTGGGAA TTTCGAGTTC
CTGTTCAGCG ACCCCTTCTA CCGCGCGTCC TTCGTGACCA CGGCGGTCTT CTCGATCCTG
GTGACAGTGG TATCGATGGG CGTCGCACTC TATCTCGCGC TGCTGGCGGA CCGGCTGATC
AAGGGGTCCG GGACGTACCG GACGCTGCTG ATCTGGCCCT ATGCGGTGGC CCCGGCGGTG
GCGGGGGTGC TGTGGCTGTT CATGTTCAAC ACGCGGGTGG GCGTGGTGAC CTGGTACCTG
GGTCAGTTGG GCTACGACTG GAACCATGTT CTCAACGAGG AAGAGGCCAT GGGGCTGGTG
GTCGTGGCCA GCGCTTGGGG GCGGATCAGC TACAACTTTC TGTTTTTCCT CGCCGGGCTG
CAAGCGATCC CGAAATCGGT GATCGAGGCG GCGGCGATCG ACGGGGCGCG GTTCTGGACC
CGGTTCCGGA CGATCGTCTT TCCGCTCCTG TCGCCGGTGA CGTTTTTCCT GCTGGTGGTG
AACATTATCT ACGCCTTCTT CGAGACCTTT GGGGTGATCC ACACGATCAC CAGCGGCGGG
CCGCAGCAGG CGACGACGAT CCTGGTTTAC AAGGTCTATT CCGACGGGTT CGTGGGGCAG
GATCTGGGCT CCTCAGCGGC GCAGTCGGTG GTGTTGCTGG TGCTGGTGTC GATCCTGACG
GTGATCCAGT TCAAATACGT GGAACGGAAG GTGCATTACT GA
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| Protein sequence | MEKRVTFKGL WLPLLLVAPQ IVITALFFFY PAGQAIWQSL FIPDPFGLSM QWVGLGNFEF
LFSDPFYRAS FVTTAVFSIL VTVVSMGVAL YLALLADRLI KGSGTYRTLL IWPYAVAPAV
AGVLWLFMFN TRVGVVTWYL GQLGYDWNHV LNEEEAMGLV VVASAWGRIS YNFLFFLAGL
QAIPKSVIEA AAIDGARFWT RFRTIVFPLL SPVTFFLLVV NIIYAFFETF GVIHTITSGG
PQQATTILVY KVYSDGFVGQ DLGSSAAQSV VLLVLVSILT VIQFKYVERK VHY
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