| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1968 |
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| Symbol | aceE |
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| ID | 5712962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2077242 |
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| End bp | 2079899 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267892 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_001533309 |
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| Protein GI | 159044515 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0676932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA CCAAGCACGA TATCGACCCG GTGGAATCCC AGGAATGGCA GGAAGCCATC
GAGGATGTGA TCGCCCGGGA CGGCGCGGAT CGCGCCCATT ACCTTCTGGA CAAGGCGGTG
CAGCAGGCCC GCGCGGCGGG CGCGACCCTG CCGTTCTCGG CCACCACGCC CTACCAGAAC
ACCATTCCCG CCGATGACCA GTACGACTTC CCCGGCGACC TGGAGATGGA ATGGCGGATC
CGCACCATCA ACCGCTGGAA CGCCATGGCC ACGGTCGTGC GCCGCAACAA GGTCAGCTCG
GAATATGGCG GGCATATCGC GTCCTTTGCG TCCTCGGCGG TGATGTATGA CGTGGGTCTG
AACCACTTCT GGCGCTCGAA ATCGGCGATC CACGGTGGGG ATCTCGTGTT CTTCCAGGGC
CATGTGATCC CGGGGATCTA TGCGCGGTCC TTCATGGAAG GCCGGATCAG CGAGGAGCAG
CTGGAAAATT TCCGCTCCGA AGTCGACGGG TCCGGCCTGT CATCCTATCC GCACCCTTGG
CTGATGCCGG ACTACTGGCA GTTCCCGACC GTGTCGATGG GGCTCGGCCC GCTCATGGCG
ATCTACCAGG CGCGGTTCAT GAAATACATG CACAGCCGGG GCCTCATCGA CATGGCCGAC
CGCAAGGTGT GGTGTTTCCT GGGCGATGGC GAGATGGACG AGCCGGAAAG CCGGGGCGCC
ATTGACCTCG CGGTGCGCGA GGGGCTGGAC AACCTGATCT TCGTGATCAA CTGCAACTTG
CAACGGCTCG ACGGACCGGT GCGCGGCAAT GGCAAGATCG TGCAGGAGCT GGAAGGCGAC
TTCCGCGGCG CGGGCTGGAA CGTCATCAAG CTGCTCTGGG GCAAGGGTTG GGACGAATTG
CTGGAGAAAG ACGTCTCGGG CCGGTTGCGC CAGCTGATGG ACGAGACCGT GGACGGCGAT
TACCAGACGT TCAAATCCAA GGACGGCGCC TATATCCGCA AGCATTTCTT TGGCAAGTAT
CCCGAGACCG CGGCGCTGGT CGAGGACTGG ACCGATGAGC AGATCTGGGC GCTGCGCCGG
GGCGGGCACG ATCCGCAAAA GGTCTATACC GCGTTCAAGA AGGCGACCGA GACCAAGGGG
CAGCCGAGCT GTCTGCTGGT CAAGACCGTG AAGGGTCACG GGATGGGCAC GGCCGGCGAG
GGCCAGAACA CCACCCACCA GCAAAAGAAG ATGAACGAGG AGCAGTTGCG CGCCTTCCGC
GACCGGTTCA AGATCCCTGT CAGCGACGAG GATGTCGGCA AGGCCCCGTT CGTGGCGCTG
AACAACGCGC AGAAGGCCTA TATCCTGGAG CGGCGCAAGG AGCTGGGCGG CGAGTTCCCG
AAGCGCGAAT GGCGCGACAC CCCCAAGCTG GAGATCCCTG CGCTGGAGGC GTTCGGCAAG
GAGCTGAAAT CCACCGGCAC GCGTGAGATT TCGACCACCA TGGCCTTCGT GCGGATACTG
ACGACGCTCT TGCGCGACAA GAACATCGGC AAGCAGGTCG TGCCGATCGT GCCGGACGAG
AGCCGCACCT TCGGGATGGA AGGCTTGTTC CGCTCGGTGG GGATCTACAA CCCGATGGGG
CAGACCTACA TCCCCGAAGA CCGGGACCAG ATGTCCTATT ACAAGGAGAG CGAGACGGGA
CAGGTCCTGC AGGAGGGCAT CAACGAGGCC GGGGCCATGG CCGACTGGAT CGCGGCGGCC
ACGTCGTACT CCAACCACGG CGTGCCGATG ATCCCGTTCT TCATCTACTA CTCTATGTTC
GGGTTCCAGC GGATCGGCGA CCTGGCCTGG GCCGCGGGCG ACAGCCGTGC GCGGGGCTTC
ATGCTGGGCG GCACCGCCGG GCGCACGACG CTGAACGGCG AGGGGCTGCA GCACGAGGAC
GGGCATTCCC ACATCCTGGC GGGCACCATC CCGAACTGCA TCAGCTACGA TCCGACCTTC
AGCTACGAGG TGGCGGTGAT CGTCCATCAC GGGCTCAAGC GGATGTATGT CGAGCAGGAC
GACGTGTATT TCTACCTGAC GCTGATGAAC GAGAACTACA CCCATCCGGA CATGCCGATG
GGTGTAGAAG AGGACATCAT CAAGGGGCTT TACCGGTTCT CGAAAACCGC CAAGCCGAAC
AAGAAGCATG TCAACCTGAT GGGGTCGGGC ACGATCCTGG TGCAGGCGAT CAAGGCGGCC
GAGATGCTGA AGGAAGACTT CGGCGTGACC TCGGACATCT GGTCGGCGAC CTCGATGAAC
GAGCTGGCCC GCGACGGGCA GGATTGCGCA CGGGCCAACC GGCTCGACCC CCTTGGAGAT
CAGAAGGTGC CGTTTGTCAC GCAACAGCTT GAAGGGGTGA CCGGACCGGT CATCGCGGCC
ACCGATTACA TGAAGAACTA TGCCGAACAG ATCCGCGCGT TCGTGCCGCA GGACTTCACG
GTCCTGGGCA CCGACGGGTT CGGGCGGTCC GACAGCCGGG TCAACCTGCG CCGGTTCTTC
GAGGTGGATT CCAACCACAT CGCCGCCGCG GCCATGGTCG CGCTGCACAG GCAGGGGACC
GTCACCGATG CGGTGCTGAA AAAGGCGCTC GCCCGGTACG AGATCGACAG CAACAAGCCG
AACCCCCGTC TGGTGTGA
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| Protein sequence | MTDTKHDIDP VESQEWQEAI EDVIARDGAD RAHYLLDKAV QQARAAGATL PFSATTPYQN
TIPADDQYDF PGDLEMEWRI RTINRWNAMA TVVRRNKVSS EYGGHIASFA SSAVMYDVGL
NHFWRSKSAI HGGDLVFFQG HVIPGIYARS FMEGRISEEQ LENFRSEVDG SGLSSYPHPW
LMPDYWQFPT VSMGLGPLMA IYQARFMKYM HSRGLIDMAD RKVWCFLGDG EMDEPESRGA
IDLAVREGLD NLIFVINCNL QRLDGPVRGN GKIVQELEGD FRGAGWNVIK LLWGKGWDEL
LEKDVSGRLR QLMDETVDGD YQTFKSKDGA YIRKHFFGKY PETAALVEDW TDEQIWALRR
GGHDPQKVYT AFKKATETKG QPSCLLVKTV KGHGMGTAGE GQNTTHQQKK MNEEQLRAFR
DRFKIPVSDE DVGKAPFVAL NNAQKAYILE RRKELGGEFP KREWRDTPKL EIPALEAFGK
ELKSTGTREI STTMAFVRIL TTLLRDKNIG KQVVPIVPDE SRTFGMEGLF RSVGIYNPMG
QTYIPEDRDQ MSYYKESETG QVLQEGINEA GAMADWIAAA TSYSNHGVPM IPFFIYYSMF
GFQRIGDLAW AAGDSRARGF MLGGTAGRTT LNGEGLQHED GHSHILAGTI PNCISYDPTF
SYEVAVIVHH GLKRMYVEQD DVYFYLTLMN ENYTHPDMPM GVEEDIIKGL YRFSKTAKPN
KKHVNLMGSG TILVQAIKAA EMLKEDFGVT SDIWSATSMN ELARDGQDCA RANRLDPLGD
QKVPFVTQQL EGVTGPVIAA TDYMKNYAEQ IRAFVPQDFT VLGTDGFGRS DSRVNLRRFF
EVDSNHIAAA AMVALHRQGT VTDAVLKKAL ARYEIDSNKP NPRLV
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