| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1967 |
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| Symbol | aceF |
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| ID | 5712961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2075886 |
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| End bp | 2077187 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267891 |
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| Product | dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex |
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| Protein accession | YP_001533308 |
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| Protein GI | 159044514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0696439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGGA ATGAGAAGGA CAAGACAATG GCAATCGAAG TAAACGTGCC CGATATCGGC
GATTTCACCG ATGTTCCGGT GGTCAGCATC CTGGTTTCGG TCGGCGATGT GGTCGCCGAA
GAAGACCCCT TGCTGGAACT GGAGAGCGAC AAGGCGACCA TGGAAGTGCC CAGCCCCGTT
GCGGGCAAGG TGGTCGAGAT CAAGGTGGCC GAGGGCGATA CCGTTTCCGA AGGTACGCTG
ATCATGATGA TGGAGGCCGA AGATGGCGCG GCGGGCGCCT CGGAGCCGGC GCCTTCGGCA
CCAGCCGCCT CGGCGCCCGC GGCCCCGTCC GCTGCCGCGC CCGCGGCCCC CACCGACCCC
AAGCCTGCGC CGGTGACCGA TGCGGGCTTC GGCAAGGCCC ATGCGAGCCC CTCGGTGCGG
GCCTTCGCCC GGTCCCTGGA GATCGATCTG AGCAAGGTCA ACGGCACCGG CCGCAAGGGG
CGCATCCTGC GCGAGGATGT GACCGCCTAT CTGAAATCCA GCACGGCGCC TGCACCCGCC
AAGGGGGGGG CTGCGTCCGG GGGCATGGGT ATTCCGCCGA TCCCGGTGGT GGATTTCTCG
AAATTCGGCC CGGTCGAGGA CGTGGAGATG CCGCGGATCA AGAAGATTTC CGGCCCTGCG
TTGCACCGGT CCTGGCTGAA CATCCCGCAC GTCACCCATA ACGACGAGGC GGACATCACC
GATCTCGACA AGTACCGCAA GGAGATGGAC ACCCAGGCCA AGGAAGACGG CTACCGGGTG
ACGCTTCTGT CTTTCGTGAT CAAGGCGAGC GTCTCGGCAT TGAAGACCCA TTGGGAATTC
AACAGCTCGA TCCATCCCGA CGGCGACAAG CTGATCAAGA AGGCGTTCTA CAATATCGGC
TTTGCGGCGG ACACGCCCAA CGGGCTGATG GTGCCGGTGA TCAAGGATGC GGACCGCAAG
GGGCTGGTGG AGATTTCCAA GGAGCTGATG GAGCTGTCGG CCAAGGCCCG TGCGGGTGAG
TTGAAGGGGC CGGACATGCA GGGCGCGACC TTCACCATCT CGTCGCTCGG CGGGATTGGC
GGGACGTCCT TCACGCCCAT CGTCAACGCA CCCGAGGTGG CGATCCTGGG CCTGACACGC
TCGAAGATGG CGCCGGTCTG GAATGGCGAG GAGTTCGTGC CGCGCCTGAT GCAGCCGCTC
TCGCTGAGCT ATGACCACCG GGCGGTGGAC GGGGCCCTGG CGGCGCGGTT CTGCGTGACG
CTCAAGACCC TGCTCGGCGA TATGCGCAAG TTGATGTGGT AA
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| Protein sequence | MPGNEKDKTM AIEVNVPDIG DFTDVPVVSI LVSVGDVVAE EDPLLELESD KATMEVPSPV
AGKVVEIKVA EGDTVSEGTL IMMMEAEDGA AGASEPAPSA PAASAPAAPS AAAPAAPTDP
KPAPVTDAGF GKAHASPSVR AFARSLEIDL SKVNGTGRKG RILREDVTAY LKSSTAPAPA
KGGAASGGMG IPPIPVVDFS KFGPVEDVEM PRIKKISGPA LHRSWLNIPH VTHNDEADIT
DLDKYRKEMD TQAKEDGYRV TLLSFVIKAS VSALKTHWEF NSSIHPDGDK LIKKAFYNIG
FAADTPNGLM VPVIKDADRK GLVEISKELM ELSAKARAGE LKGPDMQGAT FTISSLGGIG
GTSFTPIVNA PEVAILGLTR SKMAPVWNGE EFVPRLMQPL SLSYDHRAVD GALAARFCVT
LKTLLGDMRK LMW
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