Gene Dshi_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1913 
Symbol 
ID5712906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1996738 
End bp1997559 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID641267838 
Productputative insertion element 
Protein accessionYP_001533256 
Protein GI159044462 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000339403 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACTGGG CCATGAAGAC AAAAGGCTAC AATCAGCGCC GGGCGTGCGC GCTGGCGGGG 
ATCGATCCGC GTGTGTATCG GCGTCGGTCG AAGCGCCTTG CCGACACGGA ACTGCGGGTG
AGGATGAAAG AACTGGCGTC CGAGCGGCGT CGGTTCGGTT ATCGCCGCCT GCACATGCTG
CTGAAGCGTG AGGGCTGGGA GGTAAACTGG AAGAAACTGT ACCGGCTCTA CCGCGACGAA
GGGTTAACCG TTCGTAAACG GGGCGGACGC AAGCGCGCAG TGGGCACCAG GACGCCCATG
GCGATCCCGC AGGGGCCAAA CCAGAGGTGG TCCCTCGACT TCATGTCGGA TGCGCTGGAA
GACGGGCGTC GGTTCAGGGT GCTAAACGTG ATTGATGACT TTAGCCGGGA ATGTCTGGCC
GCTGTGGTCG ATACATCCAT CAGCGGCGCA CGTGTCGCCC GCGAGTTGGA TCGGATCGCC
GAGCTGCGTG GGTACCCCTG CCTTGTGGTC AGCGACAATG GAACCGAACT GACAAGCAAC
GCGATGCTGA AATGGCAGGA AGACCGTAAA GTCGACTGGC ACTACATCGC GCCCGGAAAG
CCCATGCAGA ATGGCCTCGT CGAAAGCTTC AACGGGAGGA TGCGAGAGGA ATGCCTGAAC
GAACACCTGT TCCCGTCACT GCGCCATGCC TGCCGCATGA TTGCGGCATG GCGCGACGAC
TACAACCACC ACCGCCCGCA CTCGAGTCTC GACGGGCTCA CCCCGCGGGA GTATCACCAA
CGGTCAAGAG AGGACCAAAC CCTGAACAGA GCTAACCTAT AA
 
Protein sequence
MDWAMKTKGY NQRRACALAG IDPRVYRRRS KRLADTELRV RMKELASERR RFGYRRLHML 
LKREGWEVNW KKLYRLYRDE GLTVRKRGGR KRAVGTRTPM AIPQGPNQRW SLDFMSDALE
DGRRFRVLNV IDDFSRECLA AVVDTSISGA RVARELDRIA ELRGYPCLVV SDNGTELTSN
AMLKWQEDRK VDWHYIAPGK PMQNGLVESF NGRMREECLN EHLFPSLRHA CRMIAAWRDD
YNHHRPHSSL DGLTPREYHQ RSREDQTLNR ANL