Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1913 |
Symbol | |
ID | 5712906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1996738 |
End bp | 1997559 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641267838 |
Product | putative insertion element |
Protein accession | YP_001533256 |
Protein GI | 159044462 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000339403 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACTGGG CCATGAAGAC AAAAGGCTAC AATCAGCGCC GGGCGTGCGC GCTGGCGGGG ATCGATCCGC GTGTGTATCG GCGTCGGTCG AAGCGCCTTG CCGACACGGA ACTGCGGGTG AGGATGAAAG AACTGGCGTC CGAGCGGCGT CGGTTCGGTT ATCGCCGCCT GCACATGCTG CTGAAGCGTG AGGGCTGGGA GGTAAACTGG AAGAAACTGT ACCGGCTCTA CCGCGACGAA GGGTTAACCG TTCGTAAACG GGGCGGACGC AAGCGCGCAG TGGGCACCAG GACGCCCATG GCGATCCCGC AGGGGCCAAA CCAGAGGTGG TCCCTCGACT TCATGTCGGA TGCGCTGGAA GACGGGCGTC GGTTCAGGGT GCTAAACGTG ATTGATGACT TTAGCCGGGA ATGTCTGGCC GCTGTGGTCG ATACATCCAT CAGCGGCGCA CGTGTCGCCC GCGAGTTGGA TCGGATCGCC GAGCTGCGTG GGTACCCCTG CCTTGTGGTC AGCGACAATG GAACCGAACT GACAAGCAAC GCGATGCTGA AATGGCAGGA AGACCGTAAA GTCGACTGGC ACTACATCGC GCCCGGAAAG CCCATGCAGA ATGGCCTCGT CGAAAGCTTC AACGGGAGGA TGCGAGAGGA ATGCCTGAAC GAACACCTGT TCCCGTCACT GCGCCATGCC TGCCGCATGA TTGCGGCATG GCGCGACGAC TACAACCACC ACCGCCCGCA CTCGAGTCTC GACGGGCTCA CCCCGCGGGA GTATCACCAA CGGTCAAGAG AGGACCAAAC CCTGAACAGA GCTAACCTAT AA
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Protein sequence | MDWAMKTKGY NQRRACALAG IDPRVYRRRS KRLADTELRV RMKELASERR RFGYRRLHML LKREGWEVNW KKLYRLYRDE GLTVRKRGGR KRAVGTRTPM AIPQGPNQRW SLDFMSDALE DGRRFRVLNV IDDFSRECLA AVVDTSISGA RVARELDRIA ELRGYPCLVV SDNGTELTSN AMLKWQEDRK VDWHYIAPGK PMQNGLVESF NGRMREECLN EHLFPSLRHA CRMIAAWRDD YNHHRPHSSL DGLTPREYHQ RSREDQTLNR ANL
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