Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1883 |
Symbol | |
ID | 5712875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1960643 |
End bp | 1961485 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641267807 |
Product | putative clpA/clpB family protein |
Protein accession | YP_001533226 |
Protein GI | 159044432 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0406023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.307774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTCG AAGGTACACA GGCATATGTC GCCACCGACG ATCTCAAGGT GGCGGTCAAC GCGGCCGTGA CCCTGGAACG TCCGCTGCTG GTCAAGGGCG AGCCGGGCAC CGGCAAGACC GAACTGGCCC GCCAGGTCGC CGCCGCGCTC GATCTGCCGA TGATCGAATG GTCGATCAAA TCCACCACCC GGGCCCAGCA GGGGCTCTAT GAATACGACG CGGTCAGCCG GTTGCGCGAC AGCCAACTGG GCGAGGACCG GGTCCATGAC GTGTCCAACT ACATCAAGAA GGGCAAGCTC TGGCAGGCGT TCGAGGCCGA CGGCAAGGTC GTCCTGCTGA TCGACGAGAT CGACAAGGCC GATATCGAGT TTCCCAACGA CCTGCTGCAG GAACTCGACC GGATGGAATT CTTCGTCTAC GAGACCGGCG AGACCATCCG CGCCAAGGTC CGGCCCATCG TCATCATCAC CTCGAACAAT GAAAAGGAGC TGCCCGACGC CTTCCTGCGG CGCTGCTTTT TCCACTACAT CGCCTTTCCG GGCGAAGAGA CCCTGCGCAA GATCGTCGAG GTCCATCATC CGGGCATCAA GGGCGCGCTG TTGTCCACGG CGCTGACCCA GTTCTACGAG ATCCGCGAGA CCCCGGGGCT GAAGAAGAAG CCCTCGACCT CCGAGGTGCT GGACTGGCTC AAGCTGCTGC TGGCCGAGGA CCTGTCGCCC GAGGATCTCA AGCGCGACGG GGCCAATGCG CTGCCCAAGC TCCACGGCGC GCTCCTGAAA AACGAGCAGG ACGTGGCCCT GTTCGAACGG CTGGCCTTCA TGGCGCGCTC CGGGCGCCGC TGA
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Protein sequence | MRFEGTQAYV ATDDLKVAVN AAVTLERPLL VKGEPGTGKT ELARQVAAAL DLPMIEWSIK STTRAQQGLY EYDAVSRLRD SQLGEDRVHD VSNYIKKGKL WQAFEADGKV VLLIDEIDKA DIEFPNDLLQ ELDRMEFFVY ETGETIRAKV RPIVIITSNN EKELPDAFLR RCFFHYIAFP GEETLRKIVE VHHPGIKGAL LSTALTQFYE IRETPGLKKK PSTSEVLDWL KLLLAEDLSP EDLKRDGANA LPKLHGALLK NEQDVALFER LAFMARSGRR
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