| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1871 |
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| Symbol | |
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| ID | 5712863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1950576 |
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| End bp | 1951223 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267795 |
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| Product | putative HTH-type transcriptional regulator |
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| Protein accession | YP_001533214 |
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| Protein GI | 159044420 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0589891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.573197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CCAGACTGCC CCACCAGGAC CCCCACCGCC TGCGCGATGC GCCCGACAAG
ACGCTGGAGG CCGCCATCGG CCGCGCCCTG CGGGCCTTCC GGCGCGAGCA GGGCACAACC
GTGGTCGAAC TTTCCGCCGC CACGGGCCTC AGCACCGGCA TGCTGTCCAA GATCGAGAAC
GGCCAGACCT CGCCGTCGCT GACCACCCTG CAGGCCCTTG CGAACGCGCT CTCGGTCCCG
CTGACGGCCT TCTTCCGCGG GTTCGAGCAG TCCCGCGCCG CCGTCCACAC CCGCGCGGGC
GAGGGGGCAG AGGCCGAGCG CGAAGGCACC CGCGCCAACC ACCACTACAC CCTGCTCGGC
CATATCGGCG CCAACACCTC CGGCGTGATC GTCGAGCCCT ACCTCATTAC CCTGACCGAA
GCCTCCGACA CCTTCCGCAC CTTCCAGCAT GGCGGGATCG AGACGATCTA CATGCTCGAA
GGTGCGGTCG ACTACCGCCA TGGCGACCGC ATCTACCCCC TGCGCCCGGG AGACACCCTG
TTCTTCGACG CCGACGCGCC CCACGGGCCG GAAACCCTGG TGGAGCTGCC CGCGCGCTTC
CTGTCGATCA TCAGCTACCC GCAGGAGCGC GGATCCCCCT CAAGGTGA
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| Protein sequence | MSTARLPHQD PHRLRDAPDK TLEAAIGRAL RAFRREQGTT VVELSAATGL STGMLSKIEN
GQTSPSLTTL QALANALSVP LTAFFRGFEQ SRAAVHTRAG EGAEAEREGT RANHHYTLLG
HIGANTSGVI VEPYLITLTE ASDTFRTFQH GGIETIYMLE GAVDYRHGDR IYPLRPGDTL
FFDADAPHGP ETLVELPARF LSIISYPQER GSPSR
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