Gene Dshi_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1831 
Symbol 
ID5712822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1911041 
End bp1911544 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID641267754 
Productputative universal stress protein 
Protein accessionYP_001533174 
Protein GI159044380 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.322893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TGATCACCCA CATCCTGTGC GCGACCGACC TGTCCAAGCA CTCGGCCTAT 
ACCATGTGCC ACGCGGCCAA CCTGGCGGCG GTGACCGGCG CCAAGCTGCA CCTGGTGCAC
GCGGTCCAGC CGATGAGCGA CGAGACCCGG ATCGCGCTGC AACTCTACAT GCAGACCACC
GGATCCAGCG AAACCGCCGA CAAGGCCCGG CATGCCCATC TCAAGACTGT CATGGCCGAG
CGCCAGCGCG AATTCTGGGC CCATGTCAGC GAGGAAGACC GCGACATCCA GAACCAGGTG
GCGTCGATCG AGCTGGTCGA TGGCCACCCG GCCGAGGTCA TCCTGCGCCG GGCGACCGAA
CTGGAATGCG ACCTGATCGT GCTGGGGGCC CATGAACACG GCTTCTCGCA CACCTTCCTC
GGCACCGTCG CGAAACGCGT TCTGCGCCGA TCCACCATTC CGACGCTCGT GGTCCCGTAT
CGCGATACCG CCCCGAGCGC CTAG
 
Protein sequence
MKQMITHILC ATDLSKHSAY TMCHAANLAA VTGAKLHLVH AVQPMSDETR IALQLYMQTT 
GSSETADKAR HAHLKTVMAE RQREFWAHVS EEDRDIQNQV ASIELVDGHP AEVILRRATE
LECDLIVLGA HEHGFSHTFL GTVAKRVLRR STIPTLVVPY RDTAPSA