| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1796 |
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| Symbol | trpE |
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| ID | 5712784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1867111 |
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| End bp | 1868640 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267716 |
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| Product | anthranilate synthase component I |
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| Protein accession | YP_001533139 |
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| Protein GI | 159044345 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
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| TIGRFAM ID | [TIGR00564] anthranilate synthase component I, non-proteobacterial lineages |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00033121 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.176001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA CCCCCAGTTT CGACGCCTTC GAGGCCGCCC ATGGGCGCGG CGAGAACCAG
GTGGTCTACA CCCGGCTGGC GGCGGATCTG GACACGCCCG TGTCGCTGAT GCTGAAGCTG
GCGGGCGCGC GCAAGGACAG CTTCATGCTG GAATCCGTCA CCGGCGGCGA GGTGCGCGGG
CGCTACTCGG TAGTGGGGCT GAAGCCCGAT CTGATCTGGG AGTGTCGCGG CACCGGTGCG
CGGATCAACC GCTCCGCCCG GTTCGATGCG GAAGCGTTCG AAGACATCCC CGGCGACCCG
CTGGCCGCAT TGCGCGCGTT GATCGCCGAG AGCCGGATCG AGATGCCCGA TGAGCTGCCC
GCGATCGCGG CGGGGCTGTT CGGCTATCTG GGCTATGACA TGATCCGGTT GGTGGAGCAT
CTGCCGAATG TGAACCCCGA CCCGCTGGGC CTGCCGGACG CGGTGCTGGT GCGGCCCTCG
GTGGTGGCGG TTCTGGACGG GGTGAAGGGC GAGGTCACGG TGGTCTCGCC GGTCTGGGCA
AACGGTTCGG CGGGGGGCGG CCAATCGGCG CGGGCCGCTT ATGCCCAGGC GGCGGAGCGG
GTGATGGACG CGGTGCGCGA TCTGGAACGC TCCGCCATGG CCGAACGGCG CGATCTGGGC
GAGGCGGCCG AGCTCGGAGA GCCGGTCTCG AACTTCGCCC ATGCCGATTA CCTGGCCGCG
GTGGAGCGCG CCAAGGACTA CATCCGCGCC GGGGACATCT TCCAGGTGGT GCCGTCCCAG
CGTTGGTCCC AGGCCTTCCC CCTGCCGCCC TTCGCGCTTT ACCGCAGCTT GCGGCGAACA
AACCCCTCGC CCTTCATGTT CTATTTCAAC TTCGGCGGGT TCCAGATCGT GGGCGCCAGC
CCCGAGATCC TGGTGCGGGT GTTCGGCCGC GAGGTGACGA TCCGGCCGAT CGCGGGCACC
CGGCCACGGG GTGCGACACC GGCCGAGGAT GACGCGCTGG AGGCGGATCT GCTGGCAGAT
GCCAAGGAAT GCGCCGAGCA CCTGATGCTG CTCGACCTGG GGCGCAACGA TGTGGGCCGG
GTCGCCAAGA TCGGCACCGT GCGCCCGACC GAACAGTTCA TCATCGAGCG TTATTCCCAC
GTGATGCATA TCGTGTCGAA CGTGGTGGGC GAACTGAGCG AGGAGCATGA CGCGCTCTCG
GCGCTGCTGG CGGGGTTGCC GGCGGGCACG GTCTCGGGCG CGCCCAAGGT GCGGGCGATG
GAGATCATCG ACGAGCTGGA GCCGGAAAAG CGCGGGGTCT ATGGCGGGGG CTGCGGGTAT
TTCGCGGCCA ATGGCGACAT GGACATGTGC ATCGCCCTGC GCACGGCGGT GGTCAAGGAC
GAGACGCTCT ATATCCAGGC CGGGGGCGGC GTGGTCTATG ACAGCGACCC GGAGGCGGAG
TTCCAGGAGA CGGTGAACAA GGCCAAGGCG ATCCGGATGG CGGCGCAGCA GGCCGGGTTG
TTCGCGGGGC CCGCCGGGCG GAACGGCTGA
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| Protein sequence | MALTPSFDAF EAAHGRGENQ VVYTRLAADL DTPVSLMLKL AGARKDSFML ESVTGGEVRG
RYSVVGLKPD LIWECRGTGA RINRSARFDA EAFEDIPGDP LAALRALIAE SRIEMPDELP
AIAAGLFGYL GYDMIRLVEH LPNVNPDPLG LPDAVLVRPS VVAVLDGVKG EVTVVSPVWA
NGSAGGGQSA RAAYAQAAER VMDAVRDLER SAMAERRDLG EAAELGEPVS NFAHADYLAA
VERAKDYIRA GDIFQVVPSQ RWSQAFPLPP FALYRSLRRT NPSPFMFYFN FGGFQIVGAS
PEILVRVFGR EVTIRPIAGT RPRGATPAED DALEADLLAD AKECAEHLML LDLGRNDVGR
VAKIGTVRPT EQFIIERYSH VMHIVSNVVG ELSEEHDALS ALLAGLPAGT VSGAPKVRAM
EIIDELEPEK RGVYGGGCGY FAANGDMDMC IALRTAVVKD ETLYIQAGGG VVYDSDPEAE
FQETVNKAKA IRMAAQQAGL FAGPAGRNG
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