Gene Dshi_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1759 
SymbolargC 
ID5713326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1822376 
End bp1823401 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content64% 
IMG OID641267677 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_001533102 
Protein GI159044308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.608414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.998936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAATA TCGCGATTCT GGGCGCGTCC GGGTACACCG GAGCGGAGCT TGTGCGCCTC 
ATCGCCACCC ATCCCAGGAT GCGGATCACG GCCTTGTCGG CGGACCGCAA GGCGGGCCAG
ACCATGGGCG CGGTGTTTCC GCATCTGCGC CATCTCGACC TGCCGGCGCT GGTGAAGATC
GACGATATCG ATTTCGGTGG TGTGGACCTT GTGTTCTGTG CGCTGCCCCA CGCCACGAGC
CAGAGCGTCA TCGCGGCCTT GCCCAAGTCG GTGAAGATCG TGGATCTATC CGCGGATTTC
CGGCTGCGCG ACCCGGAGGC TTATGCCAAA TGGTACGGCG GCCCGCACGC GGCCCTCGAT
CTGCAGGCCG AGGCGGTCTA CGGGCTGACG GAGTTCTACC GCGAACAAAT CCGCGATGCG
CGGCTGGTGG CGGGGACCGG CTGCAACGCG GCGACCGGCC AATACGCCCT GCGACCCCTT
ATCGCGGCTG GGGTGATCGA CCTGGACGAG ATCATCATCG ACCTGAAAAC CGGGGTCTCC
GGGGCGGGGC GGTCGCTCAA GGAAAACCTG CTCCATGCGG AGTTGTCGGA GGGGGCCCAT
GCCTATGCGG TGGGGGGCAT GCACCGGCAT CTTGGCGAGT TCGACCAGGA GTTTTCGGCC
CTTGCCGGGC GCGAGATCAA GGTGCAGTTC ACGCCGCATT TACTCCCTGC AAACAGGGGG
ATACTGGCGA CTGTTTATGT AAAAGGTGAG GCGACCGAGA TCTACGATGC GCTGGCGGAC
GCCTATGAGG ACGAGCCTTT CGTGGTCATG TTGCCCGAGG GCGAGCATCC GTCCACCCGG
CATGTGCGCG GCTCCAATTT CGTGCATATC GGCGTGGTGC GGGACCGCAT TCCGGGTCGC
GCCGTGGTCA TCGCCGCGCT CGACAACCTG ACCAAGGGCA GCTCCGGTCA GGCGTTGCAG
AACGCCAACC TCATGTTAGA TATTGAAGAG ACGACGGGGC TGATGATGAC CCCCGTCTTT
CCCTGA
 
Protein sequence
MYNIAILGAS GYTGAELVRL IATHPRMRIT ALSADRKAGQ TMGAVFPHLR HLDLPALVKI 
DDIDFGGVDL VFCALPHATS QSVIAALPKS VKIVDLSADF RLRDPEAYAK WYGGPHAALD
LQAEAVYGLT EFYREQIRDA RLVAGTGCNA ATGQYALRPL IAAGVIDLDE IIIDLKTGVS
GAGRSLKENL LHAELSEGAH AYAVGGMHRH LGEFDQEFSA LAGREIKVQF TPHLLPANRG
ILATVYVKGE ATEIYDALAD AYEDEPFVVM LPEGEHPSTR HVRGSNFVHI GVVRDRIPGR
AVVIAALDNL TKGSSGQALQ NANLMLDIEE TTGLMMTPVF P