| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1700 |
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| Symbol | |
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| ID | 5713266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1769636 |
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| End bp | 1770391 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267617 |
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| Product | short-chain dehydrogenase/reductase family protein |
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| Protein accession | YP_001533043 |
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| Protein GI | 159044249 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00353062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0357096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTT CAGATCACGC CATCCTCGTT ACCGGCGGCG CCTCGGGCCT CGGCGAGGCC
ACCGTCCGCC ACCTGCGCGC CAAGGGCGCG GCGGTCGCGG TGCTCGACCG GGATGCGACC
CGCGGCCACC AGCTCGCCGC CGAAAGCGGC GCGCTCTTTT TCGAAACCGA CGTCACCGAC
GATGTCAGCG CCGAGGCCAG CGTCACCGCC GCCGCCACAG CCCTGGGCCG GATCACCGCC
TGCGTGACCT GCGCAGGGGT TGCGACCAGT GCCAAGACCC TCGGCCGCGA AGGCCCTCAC
GGGCTCGACG CCTTCCAGCG CACCATCGAC ATCAACCTGG TTGGCACCTT CAACATCGCC
CGGCTCGCGG CGGCCGAAAT GGCCCGCAAC GCACCCGATG CGGACGGCGC GCGCGGGGTG
ATCGTCACCA CGGCCTCCAT CGCCGCCTTC GACGGCCAGA AAGGCCAGGC CGCCTATGCC
GCCTCCAAGG CCGGGGTGAC GGGCCTGTCC CTGCCCATGG CCCGCGATCT GGCGCGCGAG
GGCATCCGCG TGATGTCCAT CGCCCCGGGC ATCTTCCGCA CACCGATGCT GATCGGCCTC
GGCGAAGAGA TCATGGAGGC GCTCGCGGCT GACGTGACCT TCCCCAAACG CCTCGGCGAT
CCGGTGGAAT ACGCCCGTCT CGTGGCCTTC ATCCTGGAAT GCGGCTACCT AAACGGCACG
ACCATCCGGC TCGACGGTGC GCTGCGCATG CCCTGA
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| Protein sequence | MQVSDHAILV TGGASGLGEA TVRHLRAKGA AVAVLDRDAT RGHQLAAESG ALFFETDVTD
DVSAEASVTA AATALGRITA CVTCAGVATS AKTLGREGPH GLDAFQRTID INLVGTFNIA
RLAAAEMARN APDADGARGV IVTTASIAAF DGQKGQAAYA ASKAGVTGLS LPMARDLARE
GIRVMSIAPG IFRTPMLIGL GEEIMEALAA DVTFPKRLGD PVEYARLVAF ILECGYLNGT
TIRLDGALRM P
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