| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1691 |
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| Symbol | cbiD |
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| ID | 5713257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1759483 |
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| End bp | 1760532 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267608 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiD protein |
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| Protein accession | YP_001533034 |
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| Protein GI | 159044240 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0471998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0290062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCA AGCCCGACCT TGACCGAGAC CTGCGCCGCG GCTGGACCAC GGGGGCCTGT
GCGACGGCGG CCACCAAGGC GGCGCTCAGC GCGCTCTGGG ACGGAGCGTT TCCGCGCGAG
GTGCAGATCA CGTTGCCGAA GGGGGAGACG CCGGTCTTTG CGCTGGCGCA CCAAGCGTCC
GGGCCGGGCT GGGCCGAGGC GGGGATCACC AAGGATGCGG GCGATGATCC GGACGTGACC
CACGGGGCGC TGGTGATCGC GCGGGTCGCG GCCTCGGAGG GCGGGGTGCG GTTTGTCGCC
GGGGACGGTG TGGGCCACGT GACCAAGGCG GGATTGCCGA TCGGTGTGGG CGAGCCTGCG
ATCAACCCGG TGCCGCGGGC GATGATGGTG GCGGAGGTCG AAGCGCTCGC CGCCGCCCAT
GGCCTTGCGC CGGATGTGAC GATCACCGTC TCGATCCCAG GGGGCGCGGA ATTGGCCGCC
AAGACCTGGA ACCCGCGTCT GGGCATCAAG GGCGGCCTGT CGATCCTGGG GACCACGGGC
GTGGTGCGGC CATTTTCCTG CGCGGCCTGG ATCGCGTCGA TCCACCGGGG CATCGACGTG
GCGCGCGCCG AGGGGGTCGC CCATGTGGCG GGCACCACGG GCGCGACTTC GGAGGCGACG
GTACAGCGGC TCTACGGGTT GCCGGATCAT GCGATGCTGG ACATGGGCGA TTTCGTGGGC
GGGATGGTGA AATACCTGCG CCGCCATCCG GTGCCGCGGC TGACCGTGGG GGGCGGGATC
GGCAAGATGA CCAAGCTGGC GCAGGGGGCG GTGGACCTGC ATTCCAAGCG CTCGCAGGTG
GATTTCGCGG CCCTTGCCGA CAGCTTCGGC GCGGCGGAGA TCGCGGGCTG CAACACGGCG
CTGGAGGCGC TGGAGCGGTG CGGGCCGCCG CTGGCGGAGC ATGTGGCGAC CCGCGCATTG
GCGCAGTTGC GCCGGCTGGT GGGGCCCGAG ACGGAGGTCG ATACGGTCGT GATCGACCGG
GCGGGGCAGA TCATGGGGCG GGCGTCATGA
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| Protein sequence | MTRKPDLDRD LRRGWTTGAC ATAATKAALS ALWDGAFPRE VQITLPKGET PVFALAHQAS
GPGWAEAGIT KDAGDDPDVT HGALVIARVA ASEGGVRFVA GDGVGHVTKA GLPIGVGEPA
INPVPRAMMV AEVEALAAAH GLAPDVTITV SIPGGAELAA KTWNPRLGIK GGLSILGTTG
VVRPFSCAAW IASIHRGIDV ARAEGVAHVA GTTGATSEAT VQRLYGLPDH AMLDMGDFVG
GMVKYLRRHP VPRLTVGGGI GKMTKLAQGA VDLHSKRSQV DFAALADSFG AAEIAGCNTA
LEALERCGPP LAEHVATRAL AQLRRLVGPE TEVDTVVIDR AGQIMGRAS
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