Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1636 |
Symbol | |
ID | 5712781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1698812 |
End bp | 1699540 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641267552 |
Product | hypothetical protein |
Protein accession | YP_001532979 |
Protein GI | 159044185 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.790836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00000056751 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGACCTGA AAGCCCACAT CAAATCCGCA CACGGGATCA GCGCTTTGAA TGCGCGCCTC CGCCAGATCG TCTATGGCGG CAATGACGGT ATTGTCACCA CCTTTGCCGT GGTCGCGGGC TTCGCAGGGG CCGGTGCCGA GGGCACCGCG CAGATCGGGG CCGTGGCAGT GATCCTCTTC GGCCTTGCCA ACCTGTTCGC GGATGCGGCC TCCATGGGCC TTGGCGAGTA TCTGTCGTCC CGCGCGGAGC GCGACGTCTA CCGCAAGAAT CGTCGGGAGG AGATCCGACG CTTCCGCACG GAAACCGTAT CAGAACGCAA GGAGGTGCTC GCGATTCTGG CTGAGAAGGG CCTGAGCGGT TCAGACGCCC GCGCCTTCGC CGACCAGTTA GAACACCATC CCGAGTTGAT GGCCGATTTC ATGATGCTCT ACGAATTCGG CCTGTCGGCT CCAGAGGATG GCGAAGAAGT CTGGAACGGC CTGACCACCT TCATTTCCTT TCTGGCCTTC GGGGTCTTGC CGCTGCTGCC GTTCTTTTTC GGTGTGGCGG AGGCGGATGC GCTGGCCGTT TCCGCAGGCT CCAGCCTCGG GGCGCTCTTG CTGCTCGGAT TGCTGCGCGC TCAGGCCACG GGGGAGCGGC ACCTGCGCTG CGTGGTCGAA ACCTTGCTTG TGGGTCTGGT ATGCGGGGCC GTAGCCTATG TCGTGGGATG GGTCGTGATG AGCGGCTGA
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Protein sequence | MDLKAHIKSA HGISALNARL RQIVYGGNDG IVTTFAVVAG FAGAGAEGTA QIGAVAVILF GLANLFADAA SMGLGEYLSS RAERDVYRKN RREEIRRFRT ETVSERKEVL AILAEKGLSG SDARAFADQL EHHPELMADF MMLYEFGLSA PEDGEEVWNG LTTFISFLAF GVLPLLPFFF GVAEADALAV SAGSSLGALL LLGLLRAQAT GERHLRCVVE TLLVGLVCGA VAYVVGWVVM SG
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