Gene Dshi_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1620 
Symbol 
ID5712764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1685275 
End bp1685844 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID641267535 
Producthypothetical protein 
Protein accessionYP_001532963 
Protein GI159044169 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0978634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT TCAATGCTGG CCGCGTAACG CGGCGCGCGT TGCTCGGAGC ATTTGCGGCA 
ACAGCAATCT CTGCAGCACC GGTGTATTCT AATGCCTTCG GCTTCCTGCG CGGCGGCGGC
GACATCCGTC GGCTCAAGAT GCATTCAGGG CGCACCGGCG AACGCATCGA CACGATCTAC
TGGGTCGAAG GCAAATACGT CAAGGAAGCC CTGAAGGAAA TCAATTACTT CATGCGGGAT
TGGCGCCGGG ACGCCGTTGC GCCGATCGAT CGAAGGACAA TCGATATCAT GGCCGCGGCC
CACAACATGC TGGACGTGGA CGAGCCTTAC TTGCTCCTGT CCGGGTATCG TAGCCCGCAG
ACCAACGCGA TGCTTCGCAG TCGGTCGCGC GGCGTAGCCA AGAATTCGCT TCACATGCAG
GGTCAGGCGG CAGACCTGCG GCTCGGCTCT CGCAGCGTGC GCCAGATCGC AGCCGCCGCC
GCCGCGTGCA AGGCGGGCGG CGTTGGCAAG TATTCCGGAA GCCAGTTCGT GCACATGGAT
TGTGGACCGG TACGCGTCTG GGGCCGCTGA
 
Protein sequence
MSDFNAGRVT RRALLGAFAA TAISAAPVYS NAFGFLRGGG DIRRLKMHSG RTGERIDTIY 
WVEGKYVKEA LKEINYFMRD WRRDAVAPID RRTIDIMAAA HNMLDVDEPY LLLSGYRSPQ
TNAMLRSRSR GVAKNSLHMQ GQAADLRLGS RSVRQIAAAA AACKAGGVGK YSGSQFVHMD
CGPVRVWGR