Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1620 |
Symbol | |
ID | 5712764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1685275 |
End bp | 1685844 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641267535 |
Product | hypothetical protein |
Protein accession | YP_001532963 |
Protein GI | 159044169 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0978634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACT TCAATGCTGG CCGCGTAACG CGGCGCGCGT TGCTCGGAGC ATTTGCGGCA ACAGCAATCT CTGCAGCACC GGTGTATTCT AATGCCTTCG GCTTCCTGCG CGGCGGCGGC GACATCCGTC GGCTCAAGAT GCATTCAGGG CGCACCGGCG AACGCATCGA CACGATCTAC TGGGTCGAAG GCAAATACGT CAAGGAAGCC CTGAAGGAAA TCAATTACTT CATGCGGGAT TGGCGCCGGG ACGCCGTTGC GCCGATCGAT CGAAGGACAA TCGATATCAT GGCCGCGGCC CACAACATGC TGGACGTGGA CGAGCCTTAC TTGCTCCTGT CCGGGTATCG TAGCCCGCAG ACCAACGCGA TGCTTCGCAG TCGGTCGCGC GGCGTAGCCA AGAATTCGCT TCACATGCAG GGTCAGGCGG CAGACCTGCG GCTCGGCTCT CGCAGCGTGC GCCAGATCGC AGCCGCCGCC GCCGCGTGCA AGGCGGGCGG CGTTGGCAAG TATTCCGGAA GCCAGTTCGT GCACATGGAT TGTGGACCGG TACGCGTCTG GGGCCGCTGA
|
Protein sequence | MSDFNAGRVT RRALLGAFAA TAISAAPVYS NAFGFLRGGG DIRRLKMHSG RTGERIDTIY WVEGKYVKEA LKEINYFMRD WRRDAVAPID RRTIDIMAAA HNMLDVDEPY LLLSGYRSPQ TNAMLRSRSR GVAKNSLHMQ GQAADLRLGS RSVRQIAAAA AACKAGGVGK YSGSQFVHMD CGPVRVWGR
|
| |