| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1616 |
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| Symbol | |
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| ID | 5712760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1680682 |
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| End bp | 1681893 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267531 |
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| Product | beta ketoacyl synthase |
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| Protein accession | YP_001532959 |
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| Protein GI | 159044165 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.424352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGCG TTGTGATCAC CGGCCAAGGC ACGATCAACG CCCTCGGGGT CAACGTGGCG
CAGACCCTGG AGGCGTTCCG CGAGGGACGC TGCGGGATCT CCGAGCTGGA TATCCGGGAC
GTGGATCGCC TTTCGATCCG GATTGCGGGG CAGGTCAAGG ATTACGATCC GGAAGCCGCC
TTCAACAGGC AGCAAATTTC CCTCTATGAC CGATTCACGC AGTTCACCCT CATCGCAGCA
CGAGAAGCGA TCGCGCAATC AGGCCTCCTC TTCTCCGATG ATCTCGCGTC CGAGGCCGGG
GTCGTTCTGG GCACTGCGGG GGGCGGGGTG AACACATGGG ACGAGAATTA CCGGGCCGTG
TATGAGGAGG GTAAGAACCG CGTTCATCCT TTCGTCGTAC CGAAGCTGAT GAACAACGCG
GCGGCCAGCC ATGTCTCCAT GGCTCATAAT CTAAAGGGGC CGAGTTTCAC GGTCGCGACT
GCCTGTGCCA GTTCGAACCA CGCCATGGGC CAGGCGTTTC AATTCGTCCG CTCCGGGCTG
AGCAAGGTGA TGGTCACCGG TGGGTCGGAG TCCATGCTGT GTTTTGGCGG CGTGAAAGCC
TGGGAAGGCC TGCGGGTGAT GTCTAAGGAT GGCTGCCGCC CCTTCAGCGC AAATCGCAAC
GGCATGGTGC AGGGCGAGGG CGCCGCCGTC TTCGTGTTCG AAGACTACGA ACATGCGAAG
GCACGGGGGG CCGAGATCTT GGCCGAGGTG ATCGGATTTT CCATGACCTC GGATGCTGCG
GACATCGTGA TGCCATCGAA ACAGGGCGCG GCGCGAGCCA TTTCGGGGGC GATGCGAGAT
GCGCGCGTCA ACCCGGACGA GGTCGGCTAT ATCAATGCAC ACGGAACCGG AACGGCTGCG
AATGACAAGA CCGAGTGCGC AGCGGTCGCG GACGCGTTTG GACATCACGC CGACAAGGTC
ATGCTGTCCT CCACCAAATC CATGCATGGA CACCTGATCG GCGGCACCGG CGCGGTCGAA
CTTCTGGCGT GTATCATGGC ACTACGTGAC GGGATCATAG CGCCGACGAT CGGCTATGAA
GAACCGGACC CGGAATGCGC CCTGGACGTG GTGCCGAACA CGGCACGCGA AGCCGAGGTC
TCGGTTGCCT TGAGCAATGC GTTTGCTTTC GGGGGGCTGA ACGCGGTTCT GGCCCTGCGC
AAAGCCCCCT GA
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| Protein sequence | MRRVVITGQG TINALGVNVA QTLEAFREGR CGISELDIRD VDRLSIRIAG QVKDYDPEAA
FNRQQISLYD RFTQFTLIAA REAIAQSGLL FSDDLASEAG VVLGTAGGGV NTWDENYRAV
YEEGKNRVHP FVVPKLMNNA AASHVSMAHN LKGPSFTVAT ACASSNHAMG QAFQFVRSGL
SKVMVTGGSE SMLCFGGVKA WEGLRVMSKD GCRPFSANRN GMVQGEGAAV FVFEDYEHAK
ARGAEILAEV IGFSMTSDAA DIVMPSKQGA ARAISGAMRD ARVNPDEVGY INAHGTGTAA
NDKTECAAVA DAFGHHADKV MLSSTKSMHG HLIGGTGAVE LLACIMALRD GIIAPTIGYE
EPDPECALDV VPNTAREAEV SVALSNAFAF GGLNAVLALR KAP
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