| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1605 |
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| Symbol | |
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| ID | 5712749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1668641 |
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| End bp | 1669249 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267520 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001532948 |
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| Protein GI | 159044154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.914455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.613396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAC CATCTCGCGC GAAGGCGCTT GCGACGTTCT GCTTGTCGGC GACCGTGGCT
CTTGTCCCGA TCGGTCAGGC TCTCGCGGAC ACCACGCGGT CGACCAATTC ACGCGCCTCC
CTGTTTTCCT CGCAGACATC GGTCCTCGAT CGGCGCGGGG CGACGCAGTA TTCGCATTCG
GCGCGTCTGC AGCCCCGGTC AATCTCCCGT GACGGCGAGA TCCCCTCCTA TCGTGGCAGC
TATCGGGGGC CCTATCTGGA CATGGCGCGC AACGCGGCGC GTCGGCATGG CATCCCCGAG
GACCTGTTCC TGCGCCTTGT CCAGCAGGAG AGCGGCTTCA ACCCCAAGGC GGTGTCGCAC
AAGGGGGCCA TCGGGCTGGC GCAACTGATG CCGGGCACGG CGCGCATGCT GGGCGTGAAC
CCCCATGATC CGCAACAGAA TCTCGAAGGC GGTGCGCGCT ATCTGCGGAC GCAATACCTG
CGGTTTCGCA ACTGGCGCTT GGCTCTGGCC GCCTACAACG CGGGCCCCGA GGCTGTCGCA
CGCCACAACG GCGTGCCCCC CTTCGAAGAG ACGCGCAACT ATGTGCGGCG CATCCTCGGC
ACGCTCTGA
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| Protein sequence | MTPPSRAKAL ATFCLSATVA LVPIGQALAD TTRSTNSRAS LFSSQTSVLD RRGATQYSHS
ARLQPRSISR DGEIPSYRGS YRGPYLDMAR NAARRHGIPE DLFLRLVQQE SGFNPKAVSH
KGAIGLAQLM PGTARMLGVN PHDPQQNLEG GARYLRTQYL RFRNWRLALA AYNAGPEAVA
RHNGVPPFEE TRNYVRRILG TL
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