Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1584 |
Symbol | |
ID | 5712728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1649803 |
End bp | 1650927 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641267499 |
Product | hypothetical protein |
Protein accession | YP_001532927 |
Protein GI | 159044133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.16808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0492806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAGCT TTTCTTCCGC CCCAAACACG CTCATGGACC TGCCAGATTG GGTCCCCACA CATGCCCGTC ACTACCTGGC CCATACGGAA CTGGGTCTGT CGATCCGGTC CGTTGCCCGG GAAGCGGGCT GTGCGGCCTC AACCGTGCTG CGCCAGATCC GCAAACTCGA AACCGAACGG GACGACCCCC TGATTGACGA AGCGCTCGAC ACCTTGCGTG CGCATTTCAC CCCTTCCTCT CCAGCAGAAC AGGACGTCAT CCCCATGAGC GCCCATCCCC GCATGCTTCT GAAGACCGAG ACCGCGAAAA TCGAGCGGGA GGCACGCCGC ATCCTGCGTC GGCTGTGCGA AAGCGATGCC GTGCTGGCGG TTTCACCGGA AATGGAAAAG GCCGTCGTGC TGCGGATGAC CGATGGCATT CCGCGCCGGA TTGCCGTGGT CGACCGCGGG ATCGCGCAAG CCTTCGCGCT GCAGGATTGG GTCAAGTGCC GCAGCGCGGG CAAGGTGGCG CAATACGAGA TCACCCATGC CGGGCGTCTG GCGCTGAAAC GTCTTCTGGC GGATGACGCC AAGCGCAAGA GTGGGCTGGA CACACCGGAG GTTGCGGCCT TCGCGGAACA GCATCGCGAC TGGGGCGAGC GGCAGGTCGT CGCGAGCGAC ACCGGCGAGA CCGCCCGCCT GCGCTACAAC CTGGCCGAAT CGCCCATGCT CAGCCTTGCC CGGCGTCGGG ACAAGGATGG TACGCCGTTT TTGACCGATG AGATGGTTTC TGCGGGTGAA CGGTTGCGCG AGGACTTCGA ATTGGCGCAA ATGGGTCCGC GAACAACTCA GAACTGGGAG AAGTTCTTGA CCACGTCCGA CCGCAGCAGC TTCCAGCCGG GCTCCGATCA CGGCGGTGGG TCTGGTCAGG CCAAGGATCG CGTGCACGCG GCCTTGCAGG AGCTTGGACC GGGGCTGGGC GATGTAGTGC TGCGATGCTG CTGCTTTCTC GAAGGCCTTG AAGCCGCCGA GAAGCGCATG GGTTGGTCCG CGCGCTCGGG CAAGATCGTC CTGCGGATCG CCTTGCAACG GCTGTCCGAA TACTACAAGC GTGTACACGG TCAGGGCGGC GGCCTGATCG GCTGA
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Protein sequence | MSSFSSAPNT LMDLPDWVPT HARHYLAHTE LGLSIRSVAR EAGCAASTVL RQIRKLETER DDPLIDEALD TLRAHFTPSS PAEQDVIPMS AHPRMLLKTE TAKIEREARR ILRRLCESDA VLAVSPEMEK AVVLRMTDGI PRRIAVVDRG IAQAFALQDW VKCRSAGKVA QYEITHAGRL ALKRLLADDA KRKSGLDTPE VAAFAEQHRD WGERQVVASD TGETARLRYN LAESPMLSLA RRRDKDGTPF LTDEMVSAGE RLREDFELAQ MGPRTTQNWE KFLTTSDRSS FQPGSDHGGG SGQAKDRVHA ALQELGPGLG DVVLRCCCFL EGLEAAEKRM GWSARSGKIV LRIALQRLSE YYKRVHGQGG GLIG
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