Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1551 |
Symbol | |
ID | 5712695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1613870 |
End bp | 1614322 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267466 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001532894 |
Protein GI | 159044100 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.961806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.25542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCA CCATTCTGAA CGGTCCGAAC CTCAACCTTC TGGGCACCCG CCAGCCCGAG GTCTATGGCG CGACCACCCT GGCGGATATC GAGCATATGT GCCAACGCAA GGCGCAGGCG CTCGGGCTCG AGATCGAATT CAACCAGACC AACCACGAAG GCGTGCTGAT CGATCAGATC CACGCCGCCC GCAGCGAAAG CGACGGGCTG ATCATCAACG CGGGCGCCTA TACCCACACC TCCGTGGCGC TGATGGACGC GGTGGCCTCC GTCAGCCTGC CCACGGTCGA GGTGCACCTG TCCAACATCC ACGCACGCGA ATCCTTCCGA CATACCTCGT TCCTGTCGCC GGTGGCGCTG GGGCTGATCT GCGGCTTCGG CGCGACCGGC TACGTCATGG CCCTCGACGG GATCTGGGCG CATCTGACCG CCGCGGATTC GGCCAGGCCA TGA
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Protein sequence | MHITILNGPN LNLLGTRQPE VYGATTLADI EHMCQRKAQA LGLEIEFNQT NHEGVLIDQI HAARSESDGL IINAGAYTHT SVALMDAVAS VSLPTVEVHL SNIHARESFR HTSFLSPVAL GLICGFGATG YVMALDGIWA HLTAADSARP
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