Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1537 |
Symbol | phoU |
ID | 5713194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1598428 |
End bp | 1599141 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641267452 |
Product | phosphate transport system protein |
Protein accession | YP_001532880 |
Protein GI | 159044086 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.290389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCATCG ACAACGCACA TATCGCCTCG GCCTTCGACC GCGACCTAGA AGCGATCCAG GCCCTCATCA TGAAGATGGG CGGCATGGTG GAGGAACAGA TCATCGACGC CGCCCGCTCG CTGGCCGAAC GGGACGAGGA TCTGGCCGAA ACCGTCCGTA CCCGCGACAA GCAGATCGAC GCGTTGGAAG AGCAGATCAA CGAAGAGGCC GCGCGCCTCA TCGCCCTGCG CGCACCCACC GCGGGAGATC TGCGCGTGGT GCTGACAGTG ATCAAGATGA GCGCCAATCT CGAACGCATC GGCGATTACG CCAAGAACAT GGCCAAGCGC ACCTCGATCC TGGTGCAGCT GCAGCCCGTG GGCAATTCCG CGGCTTCGCT GAAACGCATG GCACGCGATG TCGAGATGAT GCTGCGCGAT GCGCTCGACG CCTACCTGCG GCTCGATGTC GAGATGTCCG AGGCGATCCG CATGCGCGAC CAGGAAGTCG ACCAGATGTA CAATGCGCTC TTCCGCGAAT TCCTGACCCA CATGATGGAA GACCCGCGCA ACATCACCGC CTGCATGCAC CTGCATTTCA TTGCCAAGAA TATCGAACGG ATGGGCGATC ACGTCACCTC CGTGGCCGAG CAGGTGATCT ACATGGTCAC CGGCGAGCTG CCCGACGAGG ACCGGCCGAA GCAGGATCGC ACCAGCTTGG ACGCCCAGGG GTAG
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Protein sequence | MVIDNAHIAS AFDRDLEAIQ ALIMKMGGMV EEQIIDAARS LAERDEDLAE TVRTRDKQID ALEEQINEEA ARLIALRAPT AGDLRVVLTV IKMSANLERI GDYAKNMAKR TSILVQLQPV GNSAASLKRM ARDVEMMLRD ALDAYLRLDV EMSEAIRMRD QEVDQMYNAL FREFLTHMME DPRNITACMH LHFIAKNIER MGDHVTSVAE QVIYMVTGEL PDEDRPKQDR TSLDAQG
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