Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1474 |
Symbol | |
ID | 5712652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1527727 |
End bp | 1528590 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641267388 |
Product | glutamyl-tRNA synthetase class Ic |
Protein accession | YP_001532817 |
Protein GI | 159044023 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.104503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.08026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC GCTTCGCCCC TTCGCCCACC GGGCCGCTTC ATCTGGGTCA CGGCTTCTCC GCCCTGACGG CGTGGCGGAT GGCGCAGGCG GCGGGCGGCA CCTTCCTGCT TCGGATCGAA GATATCGATC CGAGCCGCGC GCGCCCGGAA TGGGAGGCGC TGATCTACGC GGATCTGCGC TGGCTGGGCC TGGATTGGCC GGAGCCGGTG ATGCGGCAGT CCGAGCGGGC CGAAGCCTAT GCCGCGGCGC TCGATGTCCT CTGGGATTGC GGCTTGCTCT ATCCCTGCAG CTGCAGTCGC CGGGACATCC AGGAGGCCGC GCGCGCCCCG CAGGAGGGCG CGCCGCTGCT GGGCCCGGAC GGCGTGGTCT ATCCCGGCAC CTGTCGCGGG CGGGACCGGG GCGGCGCCCG GCCCGAGGGT GCGGTGCTGC GGCTGGACAT GGCGGCGGCG CTGGCCGCAC TCGGCGCGCG CGAGTTGGGC TTTAGCGAGA CGGGTCAGGG GCTTGAGGGG CACGGTGGAT ATGTCGGTTT GACCCCGGAG AACTTGCTGT CCCATGTGGG GGATGTCGTC TTGTGCCGCC GGGACATGGC GACCTCCTAT CACCTGTCGG TGGTGGTGGA CGATGCCGCG CAAGGGATCA CCCATGTGGT GCGCGGGCGC GACCTGTTCG AGGCAACCGC GATCCATGTG GTGCTGCAGG CCCTCTTGGA GCTGCCGGTC CCGGACTACC ACCATCACCG CCTGATCCGC GACGCGACCG GCAAGCGGCT GGCCAAGCGC GACGATGCGC GGGCGCTGTC GGCCTATCGG GCGGAAGGGC TGTCGCCTCA GCAGGTTATC GCGTTGTTTG AAAGTTCTGC GTGA
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Protein sequence | MNTRFAPSPT GPLHLGHGFS ALTAWRMAQA AGGTFLLRIE DIDPSRARPE WEALIYADLR WLGLDWPEPV MRQSERAEAY AAALDVLWDC GLLYPCSCSR RDIQEAARAP QEGAPLLGPD GVVYPGTCRG RDRGGARPEG AVLRLDMAAA LAALGARELG FSETGQGLEG HGGYVGLTPE NLLSHVGDVV LCRRDMATSY HLSVVVDDAA QGITHVVRGR DLFEATAIHV VLQALLELPV PDYHHHRLIR DATGKRLAKR DDARALSAYR AEGLSPQQVI ALFESSA
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