Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1466 |
Symbol | obgE |
ID | 5712644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1520948 |
End bp | 1521985 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267380 |
Product | GTPase ObgE |
Protein accession | YP_001532809 |
Protein GI | 159044015 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.913357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0387806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCC TCGATCTGGC CAAAGTCTAT ATCCGCTCCG GCGGCGGCGG CACCGGGGCG ATCAGCTTCC GGCGCGAGAA ATACATCGAA TACGGTGGCC CCGATGGCGG CGATGGCGGG CGCGGCGGCG ATGTCTGGGT CGAGGCGGTC GACGGGCTCA ACACCCTGAT CGACTTCCGC TACCAACAGC ATTTCTTCGC CAAGTCCGGC CAGCACGGCA TGGGCAAGCA GCGCACCGGC AAGGACGGGG CCGGCGTGAC CCTGCGCGTG CCCGTGGGCA CCGAGATTCT CGAAGAGGAC GAAGAGACCG TGATCGCCGA CATGACCGAG ATCGGCCAAA GGGTGCTTCT GGCCAAGGGC GGCAATGGCG GCTTCGGCAA CCTGCATTTC AAATCCGCCA CCAACCAGGC CCCGCGCCGG GCCAATCCCG GCCAGCCGGG GGTGGAGCGG ACGATCTGGC TGCGGCTGAA GCTGATCGCC GATGCGGGGC TTCTGGGCCT GCCCAATGCG GGCAAGTCGA CCTTTCTCGC CGCGACCTCC AACGCCCGGC CCAAGATTGC CGATTACCCG TTCACCACCC TGCATCCCAA CCTGGGCGTC GTGGGCGTGG ACGGGACCGA GTTCGTGATG GCCGACATCC CCGGCCTGAT CGAGGGCGCC CATGAGGGCC GCGGCATCGG CGACCGCTTC CTCGGCCATG TGGAACGTTG CGCGGTGCTG TTGCACCTGG TGGACGGCAC CGCCGAGGAC GTGGTGGCCG ACTACCGCAC CATCCTCACC GAGTTGCAGG CCTATGGCGG CGCCCTGGCG ACCAAGCCGC GGGTCACGGC CCTGAACAAG ATCGACGCGC TGGACGAGCA AGAGCGTGCC GAGAAGGCCG CCGCCCTCCA GGCCGCCAGC GGCTTTCCCG TGCTGCAGCT CTCGGGCGTG TCGGGCGAGG GGGTGCAGGA TGTCTTGCGC GCCGTGCGCC GACGGATCGA CGGCGCGCGC CAGGCCGAGG AGGCCACGGA TCGGGAGGAT ACCTCTTGGC AACCCTGA
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Protein sequence | MKFLDLAKVY IRSGGGGTGA ISFRREKYIE YGGPDGGDGG RGGDVWVEAV DGLNTLIDFR YQQHFFAKSG QHGMGKQRTG KDGAGVTLRV PVGTEILEED EETVIADMTE IGQRVLLAKG GNGGFGNLHF KSATNQAPRR ANPGQPGVER TIWLRLKLIA DAGLLGLPNA GKSTFLAATS NARPKIADYP FTTLHPNLGV VGVDGTEFVM ADIPGLIEGA HEGRGIGDRF LGHVERCAVL LHLVDGTAED VVADYRTILT ELQAYGGALA TKPRVTALNK IDALDEQERA EKAAALQAAS GFPVLQLSGV SGEGVQDVLR AVRRRIDGAR QAEEATDRED TSWQP
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