| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1401 |
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| Symbol | |
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| ID | 5712577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1454386 |
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| End bp | 1455144 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267313 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532744 |
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| Protein GI | 159043950 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.948053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.617202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATTC TCGAAGTCAA AGGTGTGGGC AAGCGGTTCG GCGGCCTTCA GGCCCTGGGG
GACGTGAACC TCTCGATCAA GGAAAACTCC GTCCATGCCA TCATCGGCCC CAACGGGGCG
GGCAAATCCA CCCTGCTCAA CTGCCTGGTG GGCAAGCTGA TACCCGATAC CGGCTCGGTG
ATGTTCGACG GGCAATCCGT GCTGGGCCGC TCCCCGCACG AGATCTGCCA GATGGGCATC
TCCCGCGTCT TCCAGACGCC CGAGATCTTC GGCGACCTGA CGGTGATGGA AAACGTGCTG
ATCGCGTGTT TCGCCAAGCG CGACGGCTCG TTCGAGCTGA ACGCGATCAC CTCGGTGCGC
TCGCAATCGG ACATGCGCGA CATGGCCGAA ACCATCCTGC GGGACGTCAA CATGCTCGAC
AAGCACGCCA TGCATGCCGC GTCGCTCTCG CGCGGGGACA AGCGGCGGCT GGAGATGGCC
ATGTGCCTGG TGCAGCAGCC CCGCATGCTG CTGCTGGACG AGCCGACGGC GGGCATGGCG
CGGGCCGACA CCAACAACAC CATCGACCTG CTCAAGGAGA TTCGCGACAC CCGCGACATC
ACCATCGCGA TCATCGAGCA TGACATGCAC GTGGTGTTCT CGCTCGCCGA CCGGATCACC
GTGCTGGCCC AGGGCACCCC CCTGGTCGAG GACAGCCCCG AAAACATCAA GGGCCATCCC
AAGGTGCGCG AAGCGTATCT CGGCGAGACG GCGCACTAA
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| Protein sequence | MGILEVKGVG KRFGGLQALG DVNLSIKENS VHAIIGPNGA GKSTLLNCLV GKLIPDTGSV
MFDGQSVLGR SPHEICQMGI SRVFQTPEIF GDLTVMENVL IACFAKRDGS FELNAITSVR
SQSDMRDMAE TILRDVNMLD KHAMHAASLS RGDKRRLEMA MCLVQQPRML LLDEPTAGMA
RADTNNTIDL LKEIRDTRDI TIAIIEHDMH VVFSLADRIT VLAQGTPLVE DSPENIKGHP
KVREAYLGET AH
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