Gene Dshi_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1396 
SymbolaccB 
ID5712572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1448450 
End bp1448977 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID641267308 
Productacetyl-CoA carboxylase 
Protein accessionYP_001532739 
Protein GI159043945 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0779921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTT CAGACCACCC GATTGAGGAC GGCATGACGA ACAAGTCCCA TGATGACGAC 
GTAGCCTTTA TCAAGGCTCT TGCGGAACTT CTGCGCGCGA ATGACCTGAG CGAATTGCAG
GTCAAGCGTG AGTATGGCGA GGATGACAGT CTGAATGTGC GGGTCTCCCG GCAGATGACG
GCGGCCCCGG TCGCGGCGGC CATGCCGGTG GCGGCCCCGG CACCGATGGC CGCCCCGGTC
GCGCCAGGCG CGGCGGCCCC CGCGCCCCTC GAAGGGGGCG ACCCGGCCCA GGACCCCAAT
GCCCTGACCT CGCCCATGGT GGGCACGGCC TATCTGCAGC CCGAACCGGG CGCGGCGTCC
TTCGTGTCGA CCGGCGACAC GGTCAAGGAG GGCCAGACCG TCCTGATCAT CGAGGCGATG
AAGACCATGA ACCAGATCGC GGCCCCCCGC GCGGGCAAGG TCACGCGGAT CTTCGTCGAG
GACGGCTCGC CCGTCGAATA CGGCGCGCCC CTGATGATCA TCGAGTAA
 
Protein sequence
MRLSDHPIED GMTNKSHDDD VAFIKALAEL LRANDLSELQ VKREYGEDDS LNVRVSRQMT 
AAPVAAAMPV AAPAPMAAPV APGAAAPAPL EGGDPAQDPN ALTSPMVGTA YLQPEPGAAS
FVSTGDTVKE GQTVLIIEAM KTMNQIAAPR AGKVTRIFVE DGSPVEYGAP LMIIE