Gene Dshi_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1393 
Symbol 
ID5712569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1445608 
End bp1446195 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID641267305 
Producthypothetical protein 
Protein accessionYP_001532736 
Protein GI159043942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00750725 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGTA TTTCGAGCAG ACTTCTCTGG GCCGGGGCTC TGGCCCTGTG GGCCGTGCAG 
GCCGCGGCCG ACCCAGCCCC GGGGGGCGGA TGGTCCTGGG CGGTCCAGGG CGGTGTGATG
ACCGACGACC GCGCAGCCGA AGCCCTGACC CCGACCCGGA CAGAGTTGGA GCGCCAATTC
GTGCTGGGCG GTGTGTTGGG CTATGACCGG CAGATCGGCA CGAGCCGGTT CTCGGTCGGT
GCGGAATTGC AGGCCAATGC CCATTTCGGA GACCAGGATT TCGTGGAATT CGCGCTGCCC
GTCGCCCTGC GCTATCACCC GCGAGACAGC TGGTGGGATG CCTTCGACAG TTTCGCCTTC
GGTCTCGGCC TGTCCCATTA CACCGAAGTG TCCCAGTTGG AGAGGGCCAA TTACGACGGG
CAATCGCGGC GGACCCTGAT CTATTGGTAC CTGGAGGCGG AGTTTGCCGA GTTGTCGACC
GGTGACACGG TGTTCTGGCG CTTGCACCAC CGGTCGAATG GCTACGGGAC GTTGAAGCCC
AATGGCGGTT CGAATGCCCT GATGCTCGGG TATCGCAGGC CGTTTTAG
 
Protein sequence
MTRISSRLLW AGALALWAVQ AAADPAPGGG WSWAVQGGVM TDDRAAEALT PTRTELERQF 
VLGGVLGYDR QIGTSRFSVG AELQANAHFG DQDFVEFALP VALRYHPRDS WWDAFDSFAF
GLGLSHYTEV SQLERANYDG QSRRTLIYWY LEAEFAELST GDTVFWRLHH RSNGYGTLKP
NGGSNALMLG YRRPF