| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1371 |
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| Symbol | |
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| ID | 5712547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1424219 |
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| End bp | 1425220 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267283 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532714 |
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| Protein GI | 159043920 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.138832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGTC GCGAAGAAAT CGACGGGTTC GACCACAGCC CAGAGCCACC GAAACCCGCG
CCCGCACGCG CGCCGAAGGT CACCCCGTCG CAGCCCCTTG CGGGGGAGGC GGACCTGGCC
AGCCGCAAGG GCAATTGGCG CTACCTCGCG CCGGAGGCCG CGGCGCCCCA GGCCGACGCC
GAGGCACCGG CCGCGGCGCC CGAGCCGACG CGCGCGACGG ATGCGCCTGC GACCGTGATC
TCGGCGCGGG ATCTGGACCT GGTGTTCCAG ACCAACGATG GTCCGGTTCA TGCGCTGTCG
GGCGTCAATC TTGAGATCGG CAAGGGCGAG TTCGTCAGCT TTATCGGCCC CTCGGGCTGC
GGCAAGACCA CCTTCCTGCG CGCGGTCGCA GGGCTGGAGC ATCCCACGGG CGGCTCGCTC
ACGGTCAATG GCATGACCCC GGACGAGGCC CGGCAGGCCC GCGCCTATGG CTACGTCTTC
CAGGCGGCGG GGCTTTATCC GTGGCGCACC ATCGCCAAGA ATATCTCCCT GCCGCTTCAG
ATCATGGGCT ATTCCAAGGC CGATCAGGAG GCGCGCGTTG CCCGCGTGCT GGAGTTGGTG
GAGTTGTCGG GCTTTGCCAA GAAATACCCC TGGCAGCTGT CGGGGGGCAT GCAGCAACGC
GCGTCCATCG CGCGGGCGCT GTCCTTCGAT GCCGATATCC TGCTGATGGA CGAACCCTTC
GGAGCGTTGG ACGAGATCGT GCGCGACCAC CTCAACGAGC AGTTGCTCGC CCTGTGGAAG
CGCACCGAGA AGACCATCGG CTTCGTCACC CATTCGATCC CCGAGGCGGT CTATCTCAGC
ACCAAGATCG TGGTGATGTC CCCGCGCCCG GGCCGGATCA CGGATGTGAT CGACAGCCCG
CTCCCCCTCG ACCGCCCGCT CGACATCCGC GACACGCCGG AATTCATCGA GATTGCCCAC
CGCGTCCGCG AGGGCCTTCG GGCGGGGCAT CTGGATGAGT AG
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| Protein sequence | MLSREEIDGF DHSPEPPKPA PARAPKVTPS QPLAGEADLA SRKGNWRYLA PEAAAPQADA
EAPAAAPEPT RATDAPATVI SARDLDLVFQ TNDGPVHALS GVNLEIGKGE FVSFIGPSGC
GKTTFLRAVA GLEHPTGGSL TVNGMTPDEA RQARAYGYVF QAAGLYPWRT IAKNISLPLQ
IMGYSKADQE ARVARVLELV ELSGFAKKYP WQLSGGMQQR ASIARALSFD ADILLMDEPF
GALDEIVRDH LNEQLLALWK RTEKTIGFVT HSIPEAVYLS TKIVVMSPRP GRITDVIDSP
LPLDRPLDIR DTPEFIEIAH RVREGLRAGH LDE
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