| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1355 |
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| Symbol | |
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| ID | 5711906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1407459 |
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| End bp | 1408673 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267267 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532698 |
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| Protein GI | 159043904 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.463288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTGT TCTGGCATGG GCTTGTGACC GGCCCGGTTC TGGGCGCGCT GTGGATGGTG
GTGCTGTCGA CCACGGTGGC GGTGACCATG TCCTTTGCCA CCGGCGATCC GTTCCGTCCT
GCGATCTGGA TGTCGCTCTT GTGGGGCGGG GTATTGGGGG CGTTGCTGCC CCTGCGCCCG
GGCAAGCGGA GCGTGCAGGC GGGGGCCGGA TTGCTGGTGT TCGGGATGGT GCTGATCGGG
GTCGGTCCCA TGGTGCTGGG GCCTGAGGTG GCGCTCCTGT CGCGCTGGAT CGCGGCGGGG
GGATTGGCGG TGGTCTTTGT CTGGTCTCTG GCGCGGATCC TGCACGAGAT GCCTGCGGGG
CGGCTGAACC GGCACGAGTT CGAGGCGGCG GTGATCCGGT TTCTGACGGG CTTTGGCTAC
ATCTTCTTCA CCGCGGTCGT ACTGATCCCG TTCTACGTCA TGGTGATGAC CAGCCTGAAA
TCCCAGCAGG CGTTGTTGCA GAACCCGCTC GATTTCTCGC TGGATCTGAG CCAGGGCTGG
GGGCTGTTCC GCTCCTATGC GGAGCTTTTC GGGCAGTTCA ATTTCGGCAC TTATCTGTGG
ACCTCGTTTT TCGTGTCGGT TCTGACGGTG CTGATCACGC TCGCGTTTTC GATCCCCGGG
GCCTATGCGG TGGCGCGGTT GCGCTTTGCC GGGCGGGCGG CGTTTTCGCG GTCGATCCTT
CTGATCTACA TGGTGCCGAT GATCGTGCTG GCCCTGCCGA TCTACATCGC GTTTTCGGTC
ACGGGGCTGC GCAACACGCT GTTCGGGATC GTGCTGATCT ATCCGGTCAC CACGATCCCC
GTGGCGCTTT ATATGTTGCA GGGTTATTTC CGAGGCTTGC CGGCCGAGGT CGAGGAGGCG
GGGCTGATGG ATGGGCTCAA CCGGTTGCAA GTGATCTGGA AGATCACGCT GCCGCTGGCG
CTGCCGGCGC TGGCCTCGGT GAGCCTCTAT GTTTTCATGA TCGCCTGGAA CGAGTTCCTG
TTGGCCTTCA TGCTGCTGGA CGATCCGTCG AAATTCACGC TCACGCGCGG CATCGCCAGC
CTGAACAGCT CGGAGATCCC GCGCCAGCAC CTGATGGCCG GAGCGGTGAT CGCGACGGTG
CCGATCATGG CGATCTTTCT GGGGCTGGAG CGGTTCATGA CCAAGGGCCT GACGGCCGGA
TCGGTGAAGG GATGA
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| Protein sequence | MKLFWHGLVT GPVLGALWMV VLSTTVAVTM SFATGDPFRP AIWMSLLWGG VLGALLPLRP
GKRSVQAGAG LLVFGMVLIG VGPMVLGPEV ALLSRWIAAG GLAVVFVWSL ARILHEMPAG
RLNRHEFEAA VIRFLTGFGY IFFTAVVLIP FYVMVMTSLK SQQALLQNPL DFSLDLSQGW
GLFRSYAELF GQFNFGTYLW TSFFVSVLTV LITLAFSIPG AYAVARLRFA GRAAFSRSIL
LIYMVPMIVL ALPIYIAFSV TGLRNTLFGI VLIYPVTTIP VALYMLQGYF RGLPAEVEEA
GLMDGLNRLQ VIWKITLPLA LPALASVSLY VFMIAWNEFL LAFMLLDDPS KFTLTRGIAS
LNSSEIPRQH LMAGAVIATV PIMAIFLGLE RFMTKGLTAG SVKG
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