Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1303 |
Symbol | mvaB |
ID | 5711861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1357972 |
End bp | 1358835 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641267215 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_001532646 |
Protein GI | 159043852 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.15453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0935443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATG CGGTCGAGAT CGTCGAGGTC GGCCCGCGCG ACGGTTTGCA GAACGAGCCG GGGGTGATCG CGACCGCGCG GAAGGTCGCC CTGGTCGATA CGCTGAGCCG CGTCGGCTTC CGGCGGATCG AGGTGGCGAG CTTCGTCAGC CCGAAATGGG TGCCGCAGAT GGCCGATAGC GCCGAGGTGC TGGCCGGGAT CGCCCGCGCG CCGGGGGTGC GGTACGGCGC GCTGGCGCCG AACCTGCGCG GGTTCGAGGC GGCCCTGGCC GCGCAGGCCG ACGAGGTGGC GATCTTCGGG GCGGCGAGCG AGGGGTTCTC GCAGGCCAAT CTGAACTGTT CGATCGACGA GAGCTTTGCG CGGTTCGCGC CGATCTGCGC GGCGGCGGCG GAGGCCGCGC TGCCGGTGCG GGGGTATGTT TCCTGCGTGA CGGAGTGCCC CTATGACGGC CCGACCCCGC CCGAGGCGGT CGCGCGGGTG GCCGCGCGCC TGCGGGCGCT GGGATGCTAC GAGGTCTCGC TGGGCGAGAC GCTGGGGCGC GCGACCCCTC GGGCGGTGGC GCGGATGCTG GAGGCCGTGC TGGCGGAGCT GCCCGCGGCG GAGCTGGCCG GGCATTTCCA CGACACCGCC GGGCGGGCCC TGGCCAATAT CGATGCCGCA CTCGACGCGG GGCTGCGGGT CTTCGATGCC TCCGCCGGGG GGCTGGGGGG CTGTCCCTAT GCGCCCGGAG CGGCGGGCAA CGTGGCGACC GAGGCCGTGG CGGCGCATCT CGCGGCGGCC GGTTACGAGA CCGGGCTCGA TCGCGACGCG CTGGACCGGG CGGCGCAGAT GGCGCGGGCC CTGCGCCGAA AGGAGCGCGC ATGA
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Protein sequence | MSHAVEIVEV GPRDGLQNEP GVIATARKVA LVDTLSRVGF RRIEVASFVS PKWVPQMADS AEVLAGIARA PGVRYGALAP NLRGFEAALA AQADEVAIFG AASEGFSQAN LNCSIDESFA RFAPICAAAA EAALPVRGYV SCVTECPYDG PTPPEAVARV AARLRALGCY EVSLGETLGR ATPRAVARML EAVLAELPAA ELAGHFHDTA GRALANIDAA LDAGLRVFDA SAGGLGGCPY APGAAGNVAT EAVAAHLAAA GYETGLDRDA LDRAAQMARA LRRKERA
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