| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1289 |
|---|
| Symbol | |
|---|
| ID | 5711847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1342529 |
|---|
| End bp | 1343269 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641267201 |
|---|
| Product | glutamine amidotransferase |
|---|
| Protein accession | YP_001532632 |
|---|
| Protein GI | 159043838 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0579596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.253406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGT TTCTGATCCT GCAACTGCGC CCCGAACCGG AGGTGTCCGA CGACGAGTAT
GCCGCGATCC TGACCAAGTC GGGCCTGCGC GCGCAGGACA CGCAGCGGAT CTGTCTCGAT
CACGAGAAAC TGCCCGATGA GCTTGATCTC GCGGATTATT CCGGCGTGAT CGTCGGCGGC
GGGCCGGGCT GTATCAGCGA CCCCGCAGAG GTGAAAACAC CGACCGAGGC GCGGATCGAG
GCGGCGATCC TGTCGCTCAT GCCCGAGGTG GTGGGCCGCG ACGTGCCGTT CATGGGCTGC
TGCTACGGCA TGGGTGCGCT CGGGCATCAC CTGGGTGCGG AGGTCTCCAA GCGCCGCTAT
GGCGAGGGCG TCGCCGCGGT GCCCTGCGAA CGCACCGAGG CCGGGCGCGC CGATCCGATC
CTCGCCGACC TGCCGGACCG GTTCGACGCC TTCGTCGGCC ACAAGGAGGC GTTGCAGGAC
CTGCCCAAGG GGGCCGTGCA CCTGATGCGC GGCGAGGCGT GCCCGTTCCA GATGATCCGC
TACGGGCAAA ATGTCTACGC GACCCAGTTC CACCCCGAAG CCGATGGCGA CGGCGTGGCC
CTGCGCATCC GCGCCTATCG CGACAAGGGG TATTTCCCGC CCGAAGAGGC CGAGCCCCTC
ATCGCGCGGG TCCAGCATGC GGATGTGCGC GCAAGTGCCC GTATTCTCAG GAATTTCGTG
GCCCGATACG CAACCGGTTG A
|
|---|
| Protein sequence | MKPFLILQLR PEPEVSDDEY AAILTKSGLR AQDTQRICLD HEKLPDELDL ADYSGVIVGG
GPGCISDPAE VKTPTEARIE AAILSLMPEV VGRDVPFMGC CYGMGALGHH LGAEVSKRRY
GEGVAAVPCE RTEAGRADPI LADLPDRFDA FVGHKEALQD LPKGAVHLMR GEACPFQMIR
YGQNVYATQF HPEADGDGVA LRIRAYRDKG YFPPEEAEPL IARVQHADVR ASARILRNFV
ARYATG
|
|---|
| |