Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1234 |
Symbol | pntB |
ID | 5711792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1277755 |
End bp | 1279251 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267146 |
Product | NAD(P)(+) transhydrogenase |
Protein accession | YP_001532577 |
Protein GI | 159043783 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.035089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCG GATTTACGAT TGCAGCCTAC GCGGTTGCAG CAGTTCTCTT CATCCTGTCG CTCGGGGGCC TGAGCGGTCA GGAAAGCGCG AAACGCGCGG TGTGGTACGG CATTGTCGGA ATGGCCATTG CGGTCGTGGC GACCATCATC GGGCCGGGAC AGGGGCTTGC GGGCGCGTCC ATCGTGCTGA TCGCGCTCGG CGCTGCGGTG GGCTACCAGC TGGCCACCAA GGTGCAGATG ACCCAGATGC CCGAGCTCGT GGCGATCATG CACTCGCTCG TGGGTCTCGC GGCGGTCTTC GTGGGCTTCA ACGCCGACCT GATGATCAAC GACATCGCGG CGCTCTACAC CGAGGCGGGC CAGGTTCTGG GGGCTGTCGG GCCGGATGGC TACACCGCCA TCGGCCTGCC CGTGGAGATC TATGACGGTC TGTCCTCCTT CGGGCAGCTC ATCGCCAAGA AAACGGGCGT GGAAATCGGC ATCCTGCGGG TCGAGCTGGT GCTCGGCATC TGGATCGGTG CCGTGACCTT CACCGGGTCG GTCATCGCCT ATGGCAAGCT GGCGGGCAAG GTGAACACGG CGGCCAAGCA GCTGCCCGGC GGGCACATGC TGAACGCGGC GGCGGCCGTG GGGTCGGTCG TGCTGGCGGG GATGTACCTG GGCGGTGCGG GCAGCTGGAC GTTGGTTCTG CTGACGCTGC TGGCGCTGTT CATCGGCTAT CACCTGATCA TGGGGATCGG CGGGGCGGAC ATGCCCGTGG TGGTCTCGAT GCTGAACAGC TATTCCGGCT GGGCGGCGGC GGCGATCGGC TTCAGCCTCG GCAACGACCT GTTGATCGTG GTCGGTGCGC TGGTGGGCTC GTCGGGTGCG ATCCTGTCCT ACATCATGTG CAAGGCCATG AACCGGGCCT TTATCAGCGT GATCCTCGGC GGTTTCGGCG GCTCTTCGGG CCCGCAGATG GCGGTCGAGG GCGAGCAGAT TGCCATCGAT GCCGACGGTG TGGCCACGGC GCTGAACGAG GCCGACAGCA TCATCATCAT CCCGGGCTAC GGCATGGCCG TCGCACAGGC CCAGCAGACG GTCGCGGAGC TGACCCGCAA GCTGCGCGCC AAGGGCAAGG AGGTGCGCTT CGCCATCCAC CCGGTCGCCG GGCGTCTTCC GGGGCACATG AACGTGCTGC TGGCCGAGGC GAAGGTGCCT TATGATATCG TGCTGGAGAT GGACGAGATC AACGAGGACT TCCCGGACAC GGACGTGGCC ATCGTGATCG GGTCGAACGA CATCGTGAAC CCGGCGGCAC AAGAGGACCC CAACAGCCCC ATTGCGGGGA TGCCGGTTCT GGAGTGCTGG AAGGCCAAGC AGGTGTTCGT GTCCAAGCGC GGGCAGGGCA CGGGGTATTC GGGGATCGAG AATCCGCTGT TCTACAAGGA CAACACCCGG ATGTTCTACG GCGATGCGAA GGCGAGCTTC GACAAGCTGC TTCCGCTGAT CGACTGA
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Protein sequence | MEFGFTIAAY AVAAVLFILS LGGLSGQESA KRAVWYGIVG MAIAVVATII GPGQGLAGAS IVLIALGAAV GYQLATKVQM TQMPELVAIM HSLVGLAAVF VGFNADLMIN DIAALYTEAG QVLGAVGPDG YTAIGLPVEI YDGLSSFGQL IAKKTGVEIG ILRVELVLGI WIGAVTFTGS VIAYGKLAGK VNTAAKQLPG GHMLNAAAAV GSVVLAGMYL GGAGSWTLVL LTLLALFIGY HLIMGIGGAD MPVVVSMLNS YSGWAAAAIG FSLGNDLLIV VGALVGSSGA ILSYIMCKAM NRAFISVILG GFGGSSGPQM AVEGEQIAID ADGVATALNE ADSIIIIPGY GMAVAQAQQT VAELTRKLRA KGKEVRFAIH PVAGRLPGHM NVLLAEAKVP YDIVLEMDEI NEDFPDTDVA IVIGSNDIVN PAAQEDPNSP IAGMPVLECW KAKQVFVSKR GQGTGYSGIE NPLFYKDNTR MFYGDAKASF DKLLPLID
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