| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1221 |
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| Symbol | |
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| ID | 5711779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1261791 |
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| End bp | 1263197 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267133 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001532564 |
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| Protein GI | 159043770 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.749153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.453619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CACTGGTGGG GCCCAGGCTC CGGGCCCTGC GGCGGGAACG CAAACAGACC
CAGGCCGAGA TGGCCCAGGC CCTCGGGGTG TCGCCGGCCT ATGTGAACCT GCTGGAGAAC
AACCAGCGCA GCCTGTCGGT GCAGATGCTC ATGGCGCTGA CCGAGACCTA CAACGTGGAC
TGGCGCGACC TGGTGAAGGA CGACGCGGCC ACGCAGCTGA CCGACCTGCG CCATGCCATG
CAGGACCCGG TCTTCACAGA TGCCGCCCCG GACCTGACCG AGTTGCGCGC GGCCCTGGAT
CACGCGCCCA AGCTGGTCTC GCGGCTGCTG CAGCTCCACC AGGCCCATCG CAGCACGCTT
GAAAAGGTGA TGCGCATGGG CTCCAGCGGG GTGCTGCCGG ACCTGACCGC GACCTCGCCC
GAGACGATCA TCCACGACTT CTTCCGCAAC CATCGCAACC ATTTCGACGA GCTGGAATGC
GCCGCCGAGG CTGTGCGCGC CGAGATGCCG GGTCGCCCCG ACGACATCTA TGGCGACCTC
AAGACGCGGC TCGCCACCCT GCACGGGATC ACCGTGACCC TGGAGCGTGT CCATGACATG
CCAGACAGCC TGCGGGTCTA TGATGCACGC CGCAAGGTGC TGCGGATCTC CGAGGCGCTG
GACCATCCCA ACCGCATCTT CCAGCTGGCC CATGTCCTGG GCCTGGTCGA GTTCCCCGAC
GTGTTCGACA GCCTGACCGC GGGGGCGGGG CTGCAGGAGG GCTCGGGGCT GGGGCGCTGC
CGGGTGGAGC TGGCCAACTA CTTCGCCGCC GCCCTGCTGA TGCCCTATGA CGAGATCCTG
TCGCTGGCCG AGACGACACG CTACGACGTG GACCGGATTT CGGCGGCCTT CTCGGTCTCG
TTCGAGCAGG TCTGCCACCG GCTGACCACC CTGCAGCGCG ACGGGGCGAA GGGGGTGCCG
TTCTTCTTTC TGCGGATCGA CAAGGCGGGC AATGTGTCGA AACGGTTCAA CTCGACCTCG
TTCCACCTGG CCGAATATGG CGGGGCCTGC CCGGTCTGGA ACATCCACAA CACCTTCACC
TCGCCCGGCG TGATCCTGCC GCAATTCGTG GAGCTTCCCG ACGGGGAACG TTTCTTCACC
ATCAGCCGGA CCACCGATCG CCCGGTCTTC AGCCGCGACA CGCAGGAGCG CCGCCTCGCG
GTCGCGCTCG GCTGCGAGAT GAGCCATGCG GACCGGATCG GCTATGCCGC GCCCTACCGG
GTCAGCGAAA AGGGGCTGTT CAGCAAGATC GGGATCAATT GCCAGATGTG CCCGCGCCAG
AGCTGTTCCC AGCGCGCTCA CCAGCCGCTC CACATGGATC TGCCGCTCGA CACCAACCGG
CGCGGGAACA CTCGCTACGA AAGCTGA
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| Protein sequence | MRKTLVGPRL RALRRERKQT QAEMAQALGV SPAYVNLLEN NQRSLSVQML MALTETYNVD
WRDLVKDDAA TQLTDLRHAM QDPVFTDAAP DLTELRAALD HAPKLVSRLL QLHQAHRSTL
EKVMRMGSSG VLPDLTATSP ETIIHDFFRN HRNHFDELEC AAEAVRAEMP GRPDDIYGDL
KTRLATLHGI TVTLERVHDM PDSLRVYDAR RKVLRISEAL DHPNRIFQLA HVLGLVEFPD
VFDSLTAGAG LQEGSGLGRC RVELANYFAA ALLMPYDEIL SLAETTRYDV DRISAAFSVS
FEQVCHRLTT LQRDGAKGVP FFFLRIDKAG NVSKRFNSTS FHLAEYGGAC PVWNIHNTFT
SPGVILPQFV ELPDGERFFT ISRTTDRPVF SRDTQERRLA VALGCEMSHA DRIGYAAPYR
VSEKGLFSKI GINCQMCPRQ SCSQRAHQPL HMDLPLDTNR RGNTRYES
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