| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1173 |
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| Symbol | |
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| ID | 5711941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1205414 |
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| End bp | 1206421 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267084 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_001532516 |
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| Protein GI | 159043722 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0956705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGAT CCACATCTTC GCCCCGCCTC AGCCGCCGGG CCGCCCTGCA ACTGGGGGGC
GCCGCGTTGG CCGCCCCGTT CATGGCCCGC CCCGCCCGGG CCGCGACCAC CAGGCTCACT
TTTCAGCTCG ACTGGAAGAT CAACGCCCAA TTCGCCGGGC TCTTCATGGC CGAGGCCGAG
GGACTCTATG CCGATGCGGG CCTGGAGGTC GAGATCCGCC CCTGGGCCGA CGGGGTCAAT
GTCGCCTCCG AAGTGGCCGA GGGCCGCGCC CACATGGCCT GCGCCGAGCA GAATCTGATC
CTCGGCGCCC AGGCCGCGGG TGCACCGATC AAGGCCGCCG CGACCATGTT CCAGGCCTCG
CCCTACGGGC TGATGGCCCC GGCGGGGGCG GGCCTGAGCG GGCTGGAGGC GCTGCGGGGC
AAGACCGTGG GTGTCCATGT GGACGGGCTG AAGGTCATGG CGTTGGTCAA GGGGGTGAAC
GGGATCGAGG AAATCGAAGT GGTCGAGATC CCCTATGCCG ACAAGTTTGC GCGTGCGGTC
TCGGGCGAGA TGTTCGCGGT CCAGTGCTAT GTCATCGACG AGCCGATCGG CGTGACCGCG
CGATACGGTG CCGCGCCCGA GGTGCTGAAG CTGTCCGATC ACGGGCTGTT GTCGACGGCC
CAGACGATCA TGGCCTCCGA CACGCTGCTG ACCGAGCAGC CGGAGGTGGT CGAGGCCTTC
CTCGCCGCCA CGTTCGAGGG CTGGGCACGG GTGCTGGCCG ACAAGCCCGC CGCGGCCGAA
ATGGTCGTGG GCCAGTTCGT GCCCGACGGC TCGGTCTACA AGGACGTGGC GTATCAGACC
CGCTGCCTGG AGCTGCTGGA ACCATATGTC ACCGGCGGGA CCGACGATAT CGGCGTGATC
TCCCGGCAGA AGTGGGAAGA GGCCGCCACC CGCATGGCCG AATACGGCAT CGTCGAGGCG
CTGCCGGACC TGTCCACCAC GCTCGCCGAC ACCGCCTTCG TGGCGTGA
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| Protein sequence | MPRSTSSPRL SRRAALQLGG AALAAPFMAR PARAATTRLT FQLDWKINAQ FAGLFMAEAE
GLYADAGLEV EIRPWADGVN VASEVAEGRA HMACAEQNLI LGAQAAGAPI KAAATMFQAS
PYGLMAPAGA GLSGLEALRG KTVGVHVDGL KVMALVKGVN GIEEIEVVEI PYADKFARAV
SGEMFAVQCY VIDEPIGVTA RYGAAPEVLK LSDHGLLSTA QTIMASDTLL TEQPEVVEAF
LAATFEGWAR VLADKPAAAE MVVGQFVPDG SVYKDVAYQT RCLELLEPYV TGGTDDIGVI
SRQKWEEAAT RMAEYGIVEA LPDLSTTLAD TAFVA
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