Gene Dshi_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1160 
Symbol 
ID5711928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1186149 
End bp1186988 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID641267071 
ProductMazG family protein 
Protein accessionYP_001532503 
Protein GI159043709 
COG category[R] General function prediction only 
COG ID[COG3956] Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 
TIGRFAM ID[TIGR00444] MazG family protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGG CGAAAACCCG CGACCGCGCC GACAGCGACA CGCTGTGCCA CGACCCCGAG 
GGCGGGCTGC CGCGGCTGCT GGAGATCATG CGCCGCCTGC GCGATCCCGA GACCGGATGC
CCCTGGGACG TGGAGCAGAC CTTCGAGACC ATCGCGCCCT ATACCATCGA AGAGGCCTAC
GAGGTGTCCG ACGCCATCGA CCGCGGCGAC TGGGCGGACC TGAAATCCGA ATTGGGCGAT
CTGCTGCTCC AGACCGTTTA CCAGACCCAG ATCGGGGCGG AGCGCGGGCT GTTCGACTTC
CACGACGTCG CCAACGGGAT CGCCCAGAAG ATGCTCGACC GCCACCCCCA CGTGTTCGGT
GACGAGAGCA ACGCCAAATC CGCCGAACAG CAGACCCGCG ACTGGGAGGC GCAGAAAGCC
CGCGAGCGCG CGGCCAAGGC AGAAAAAGGC GTGCTCGACG GTGTGGCGCT CGGCCTGCCG
GCGCTGATGC GCGCGCTGAA GCTGCAGAAA CGCGCGGCTC GGGTCGGGTT CGACTGGGAC
GACGCGGACC AGGTGCTCGC CAAGCTCGCC GAGGAAAGCG CCGAGTTGGC CGACGCACGC
GATGCGGGCG ACGCCGCCAA GCTGCACGAA GAGTTCGGCG ATCTGCTCTT CGTGGTAGTG
AACCTCGGCC GCCACCTTGG GCTCGATCCC GAACACGCGC TCCGGGATGC CAATGCCAAG
TTCACCCGCC GCTTCGCCCA TATCGAGGCC GAGCTCGCCC GCGCGGGGCG CAATCCGGAG
GCCGCGAGCC TCGACGAGAT GGAGGCGCTC TGGCAGGCCG CCAAGGCCAA CGGCCTCTGA
 
Protein sequence
MTRAKTRDRA DSDTLCHDPE GGLPRLLEIM RRLRDPETGC PWDVEQTFET IAPYTIEEAY 
EVSDAIDRGD WADLKSELGD LLLQTVYQTQ IGAERGLFDF HDVANGIAQK MLDRHPHVFG
DESNAKSAEQ QTRDWEAQKA RERAAKAEKG VLDGVALGLP ALMRALKLQK RAARVGFDWD
DADQVLAKLA EESAELADAR DAGDAAKLHE EFGDLLFVVV NLGRHLGLDP EHALRDANAK
FTRRFAHIEA ELARAGRNPE AASLDEMEAL WQAAKANGL