| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1150 |
|---|
| Symbol | |
|---|
| ID | 5711918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1176572 |
|---|
| End bp | 1177432 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641267061 |
|---|
| Product | ferredoxin--NADP(+) reductase |
|---|
| Protein accession | YP_001532493 |
|---|
| Protein GI | 159043699 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.990756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC CGACCGACGT GATGAGCACC GTGACAGACG CAACACCGAT CAAAGTCCCC
ACCCTTCCGG ATGCCCAGAC CGTGCTGTCG GTCAAGCACT GGACAGACCG CCTGTTTTCC
TTCCGGGTGA CGCGTCCGCA GACCCTGCGC TTCCGCTCGG GGGAATTCGT GATGATCGGC
CTGATGGGCG ACCCGGACCC CAAGACCGGC AAGCAGAAGC CGCTCCTGCG GGCCTATTCC
ATCGCCTCGC CCTCCTGGGA CGAGGAGCTG GAGTTCTATT CGATCAAGGT GCCCGACGGT
CCGCTGACCT CGCGGCTGCA ACATATCCAG CCGGGCGAGC AGATCATCCT GCGGCCCAAG
CCCGTGGGCA CGCTCGTGCA TGACGCGCTG CTGCCGGGCA AGCGGATCTG GTTCTTCGCC
ACCGGCACGG GCTTCGCCCC CTTCGCAAGC CTGCTGCGCG AGCCGCAAAC CTACGAGGAT
TACGACGAGG TCATCATCAC CCATACCTGC CGCGAGGCGG GCGAGCTGGA CTATGGCCGC
GAGGTGATCG AGAGCCTCAA GACCGACGAG CTGCTCAACG AGGTGATCGG CGACGGCTTC
TGGAAGAAGA TCAAGTACTA CCCCACCACC ACCCGCGAAC AGAGCCCCAA GATGGGCCGG
ATCACGGACC TGATGAAATC GGGGGAGTGT TTTTCGGATC TCGACGTGCC GGTGCTGTGT
CCCGAAACCG ACCGGGCGAT GATCTGCGGC AACCTGGCTT TCAATCTCGA ATTGAAGGAC
ATGCTGGAAA GCTACGGGCT CGAAGAGGGC GCCAATTCCA AACCCGCCCA TTACGTGGTG
GAAAAAGCGT TTCTGGATTG A
|
|---|
| Protein sequence | MNKPTDVMST VTDATPIKVP TLPDAQTVLS VKHWTDRLFS FRVTRPQTLR FRSGEFVMIG
LMGDPDPKTG KQKPLLRAYS IASPSWDEEL EFYSIKVPDG PLTSRLQHIQ PGEQIILRPK
PVGTLVHDAL LPGKRIWFFA TGTGFAPFAS LLREPQTYED YDEVIITHTC REAGELDYGR
EVIESLKTDE LLNEVIGDGF WKKIKYYPTT TREQSPKMGR ITDLMKSGEC FSDLDVPVLC
PETDRAMICG NLAFNLELKD MLESYGLEEG ANSKPAHYVV EKAFLD
|
|---|
| |