| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1064 |
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| Symbol | rufX |
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| ID | 5711032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1097236 |
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| End bp | 1097727 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266975 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001532407 |
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| Protein GI | 159043613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.282287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGA TTTTCGACGA TCTGGCGGCG TTTCGCGCCG TGGTGCCCGC GGGGCGGGCG
CTGATGGGGC TGGACCTCGG AACCGCGACC ATCGGGGTGG CGGTGTCGGA CCTGATGTGG
TCCGTGGCCA CGCCACTGGA GACGGTCAAG CGCAAGAAGT TCGGCCTCGA TGCCGCGCGG
CTGGAGGCGT TGATGGACGC CCGCGATGTG GGCGGGCTGA TTCTGGGCCT GCCGCGCAAC
ATGGACGGCA GCGAGGGGCC GCGGGCCCAG TCGACCCGGG CCTTTGCGCG GAATTTCACG
GCCCGGCGGC CGATCCCGAT TGCGTTCTGG GACGAGCGGT TGTCCACTGT GGCGGCGGAA
CGTGCGCTGC TGGAGGCGGA CACGTCCCGG GCCCGGCGCG CGGAAGTGAT CGACCACGTG
GCGGCGAGTT ATATCCTGCA AGGCGCACTC GACCGGTTCG GGCACATGCG CAGGGAGGCT
TTGGATGAGT GA
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| Protein sequence | MEMIFDDLAA FRAVVPAGRA LMGLDLGTAT IGVAVSDLMW SVATPLETVK RKKFGLDAAR
LEALMDARDV GGLILGLPRN MDGSEGPRAQ STRAFARNFT ARRPIPIAFW DERLSTVAAE
RALLEADTSR ARRAEVIDHV AASYILQGAL DRFGHMRREA LDE
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