| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1057 |
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| Symbol | |
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| ID | 5711025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1090625 |
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| End bp | 1091812 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266968 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001532400 |
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| Protein GI | 159043606 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AGTCCACCGC CCTGTCGCAT CTCAAGGTGC TTGACCTGAC CCGCGTGCGG
GCCGGGCCGA CCTGCTGCCG GGTGCTGGCG GATTTCGGCG CCGACGTGAT CAAGATCGAA
GCCCCCCAGG GGTTCGATCC CAACGCGGGC ATGTCCGGCG CGCGCCACGG CTACGACATG
CTGAACCTGC ACCGCAACAA GCGGTCCATG ACCCTGAACC TGAAAAAACC CGAAGGCCGG
GCCCTGTTCC TGCGGATGGT CAAGACGGCT GATGTGGTGG TCGAGAACTT CCGCCCCGAC
GTGAAGGACC GGCTCGGCAT CGGCTATGAC GACCTCGCGG CGGTGAACCC GCGCATCATC
CTCGCCTCCA TCTCCGGCTT CGGCCAGGAC GGCCCCTATG CGCGTCGCGC GGGCTTCGAC
CAGATCGCGC AAGGCATGGG CGGGCTGATG GGCGTGACCG GCATGCCCGG CGGTGTGCCG
ATCCGCGCGG GCGCCGCCGT GGCCGACAGC AGCGCGGGGA TTTTCGCCGC CACCGGCATC
CTCGTGGCGC TGGCCGAGCG TGAAAAGTCG GGGCAGGGCC AATGGGTCGC GACCTCGCTT
CTGGAGGCGC AGATCGCGCT GATGGATTTC CAGGCCGCGC GCTATCTGGT CGACGGCGAC
GTGCCGCCGC CCGCGGGCAA CGATCATCCC TACGTCACCC CCATGGGCGT GGTGGAGACC
GCCGATGGCT ATCTCAACCT CGGCGTGGGC GGGCAGGGGC AATGGGTCGC CTTCTGCAAC
GTGATCGACC AGCCCGAACT GGCCGAGCAC CCGGATTACG CCACGGACAC GGCGCGCTTT
GCCCACCGCG GGGCGCTCTG GGACCACCTG CGCCCGGTCT TTGCCCAACG CACCACCGCC
GACTGGGTCC TGGCGCTCGA GGCAGGCGGC GTGCCCGCCG GGCCGATCTA CACCATGGAC
GAGGTCTTCG CCGACCCGCA GGTGCGCCAT CTCGGCATGG CCGCGCCCGT CCACCACCCG
GTCCGGGGCG AGACGGCCCT CGTCGCCACG CCGATCAAGA TGTCCCGCAC CCCACCCAGC
GTCCATGCCA GCGCCCCCGA TGCGGGCGCC CAGACCGACG AGATCCTGGC CGAATACGGC
CTGAGCCCCG AAGAGGTCGC CCAGTTGCGC GCGGCCCACA CAATCTGA
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| Protein sequence | MTEKSTALSH LKVLDLTRVR AGPTCCRVLA DFGADVIKIE APQGFDPNAG MSGARHGYDM
LNLHRNKRSM TLNLKKPEGR ALFLRMVKTA DVVVENFRPD VKDRLGIGYD DLAAVNPRII
LASISGFGQD GPYARRAGFD QIAQGMGGLM GVTGMPGGVP IRAGAAVADS SAGIFAATGI
LVALAEREKS GQGQWVATSL LEAQIALMDF QAARYLVDGD VPPPAGNDHP YVTPMGVVET
ADGYLNLGVG GQGQWVAFCN VIDQPELAEH PDYATDTARF AHRGALWDHL RPVFAQRTTA
DWVLALEAGG VPAGPIYTMD EVFADPQVRH LGMAAPVHHP VRGETALVAT PIKMSRTPPS
VHASAPDAGA QTDEILAEYG LSPEEVAQLR AAHTI
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