| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1006 |
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| Symbol | |
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| ID | 5710522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1039975 |
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| End bp | 1041198 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266917 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001532349 |
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| Protein GI | 159043555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCC CGAAATCCAA CCGCCTGCCC TTCGTGTTCA TCCTGATCAC GTTGATCATC
GACGCCATGG GCATCGGGCT GATCCTGCCG GTTCTGCCCG ACCTGATCGG GGAGCTGGAG
GGCGGCACGC TCGGCCAGGC GGCCCTCTGG GGCGGGGTGC TGGCCACGTC TTACGCGGTG
ATGCAATTCC TCTGCGGTCC CACCATCGGC AGCCTTTCGG ATCGTTTCGG AAGACGCCCT
ATCCTGTTGG TTTCCTTGGC GGTTATGGCC GCGGACTACG TGGTGATGGC GTTTGCCGGG
TCGATCTGGC TGCTGCTGGC GGCGCGCATC GTGGGCGGGA TCGCCGCGGC CACGCAATCG
ACCGCGACGG CCTTTATCGC CGACATCTCG CGCCCCGAGG ACAAGTCCAA GAATTTCGGG
CTGGTGGGCG CGTCCTTCGG GATCGGCTTC GTGGTCGGCC CCCTGATCGG CGGGGTTCTG
GGGGAGTTCG GCACCCGCGC GCCGTTCTAT GCCGCCGCGG TGCTGGCCAG CTTCAACCTG
ATCCTGGGCT GGTACGTGCT GCCCGAAACC GTCACCGACA AGATCCGCCG CCCCTTCGAC
TGGCGCCGCG CCAACCCCCT CGGCGCCTTT CGCCACATCG GCGCGCTGCC GGGGCTAAAG
CGTTATCTGG CCTTGTTTTT TCTCTATGAA TTCGCCTTCT TCGTCTACCC GGCGATCTGG
GCCTATTTCA CCCGCGCCCA GTTCGGATGG GAGCCGGGGA TGGTCGGGCT GTCGCTGGGG
CTGTTCGGGA TCGCCATCGC CTTCGTCCAG GGCGTGCTGA TCCGCGTGGT GATCCCGCGG
CTGGGCGAGA CCAACGCGAT CCTCTACGGT TTCGTGTTCA ACTTCTTCGC CTTCATCGCC
CTCGGCCTCG TCACCTCGCC GACCCTCGCG CTGATCCTGA CGCCGATGAT CGCCCTTGGC
GCGGTGGTCA CCCCGGCGCT GCAGGGCTGC ATGTCCAAGA TCGCGGGCGC CGATCAGCAA
GGCGAGTTGC AGGGGCTGGT GTCGTCCTTC CGCTCGGTCG CGGCGATCCT GTCGCCGCTG
GTGATGACGC AGATCTTCTT CTTCTCGACC GACCCCGCGC GCGGCATCGA CATGCCCGGC
GCGCCGTTTT TCCTGTCGAT GTGCATCATG GCCCTGTGCC TGGCAATCTT CCTGCCGCGC
CGGGCCACGC CCGTGACGGC CTAG
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| Protein sequence | MSTPKSNRLP FVFILITLII DAMGIGLILP VLPDLIGELE GGTLGQAALW GGVLATSYAV
MQFLCGPTIG SLSDRFGRRP ILLVSLAVMA ADYVVMAFAG SIWLLLAARI VGGIAAATQS
TATAFIADIS RPEDKSKNFG LVGASFGIGF VVGPLIGGVL GEFGTRAPFY AAAVLASFNL
ILGWYVLPET VTDKIRRPFD WRRANPLGAF RHIGALPGLK RYLALFFLYE FAFFVYPAIW
AYFTRAQFGW EPGMVGLSLG LFGIAIAFVQ GVLIRVVIPR LGETNAILYG FVFNFFAFIA
LGLVTSPTLA LILTPMIALG AVVTPALQGC MSKIAGADQQ GELQGLVSSF RSVAAILSPL
VMTQIFFFST DPARGIDMPG APFFLSMCIM ALCLAIFLPR RATPVTA
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