Gene Dshi_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0986 
Symbol 
ID5710501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1006009 
End bp1006383 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content66% 
IMG OID641266896 
Producthelix-turn-helix domain protein 
Protein accessionYP_001532329 
Protein GI159043535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.85534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA TGGCCCGGAG CCTGAAGGAC AAGCTGGCGA CCCTCGACCC CGCCCGCCGC 
GCGGCGATCG AGGCCGAGGC GGATCGGCTG CATGCCGAGT ACCTGACGCT GCAGGAGCTG
CGGAAGGCCA AGAAGTTGAC CCAAGTCCAA CTGGCGGAAA CCCTTGGCGT CCAGCAGGCC
ACCGTCGCGA AGTACGAACG CCAGAGCGAC CTCCTGCTCT CGACACTGAC AGGCTACGTC
CGCGCGATGG GCGGGGAGCT CAAGCTGATG GTTGAGTTCC CAGGCACGGC ACCGGTGGCG
CTGGAAGGGT TGGGAGAGAC AGAAGAACCG CGACGAGCTA GGGGCGGGAG AGCGCAACGC
GCCAGTCTTT CGTAA
 
Protein sequence
MMTMARSLKD KLATLDPARR AAIEAEADRL HAEYLTLQEL RKAKKLTQVQ LAETLGVQQA 
TVAKYERQSD LLLSTLTGYV RAMGGELKLM VEFPGTAPVA LEGLGETEEP RRARGGRAQR
ASLS