Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0954 |
Symbol | engD |
ID | 5710645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 978833 |
End bp | 979930 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266865 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_001532300 |
Protein GI | 159043506 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTCA AGATGGGTAT TGTCGGGCTG CCGAATGTGG GCAAGTCGAC GCTGTTCAAC GCGCTGACCC GAACGGCGGC GGCGCAGGCG GCGAACTTTC CCTTCTGCAC CATCGAGCCG AATGTGGGCG AGGTGGCGGT GCCCGACCCG CGGCTTGATA GGCTGGCGGA GATCGCGGGG TCCAAGCAGG TGATCCCGAC GCGGATGACC TTCGTGGATA TTGCCGGTCT GGTGAAGGGC GCCTCCAAGG GGGAGGGGCT GGGCAACCAG TTTCTCGCCA ATATCCGCGA GGTGGATGCC ATCGCCCATG TGCTGCGCTG CTTCGAGGAT GGGGATGTGA CCCATGTGGA GGGGCGCGTC GATCCTATCG CCGACGCCGC CACGATCGAG ACCGAGCTGA TGCTGGCGGA TATGGAGAGT ATCGAGAAGC GGCTGCAGAA CATCGTGCGC AAGGTGCGCG GCGGCGACAA GGAAGCCGTG CAGCAGGAGC GTCTGATGCG CGCGGCCATG GCGGCGCTGG AAGAGGGCAA GCCCGCCCGC GCGGTTGCGG TCGACGCGGA GGACGCGAAG GCGTGGCGGA TGTTGCAGCT GCTGACCACC AAGCCGATCC TGTATGTGTG CAACGTGGAT GAGGCCAGCG CCGGGTCGGG CAACGCCCAT TCCAAGGCGG TGGCGACCAT GGCGGCCGAG CAGGGCGCGG CCCATGTGGT GATCTCGGCC CAGATCGAGG AAGAGATCAG CCAGCTCGAC CCGGAAGAGG CAGAGATGTT TCTGTCGGAG ATGGGGCTGG AGGAAGCCGG GCTCGATCGT CTGATCAAGG CTGGCTACGC GCTCTTGCAC CTCGAGACCT ATTTCACCGC CGGGCCGAAG GAGGCGCGCG CCTGGACGAT CCCGGCGGGG ACCCACGCAC CCCAGGCCGC GGGTGTGATC CATGGCGATT TCGAGCGCGG CTTCATCCGG GCCGAGACGA TTGCCTATGA CGACTACGTG GCGCTCGGCG GCGAGCAGGC CGCGAAGGAG GCCGGCAAGA TGCGGGCGGA GGGCAAGAGC TACGTCGTCA AGGATGGCGA CGTGCTGCAT TTCCTGTTCA ACACCTGA
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Protein sequence | MGFKMGIVGL PNVGKSTLFN ALTRTAAAQA ANFPFCTIEP NVGEVAVPDP RLDRLAEIAG SKQVIPTRMT FVDIAGLVKG ASKGEGLGNQ FLANIREVDA IAHVLRCFED GDVTHVEGRV DPIADAATIE TELMLADMES IEKRLQNIVR KVRGGDKEAV QQERLMRAAM AALEEGKPAR AVAVDAEDAK AWRMLQLLTT KPILYVCNVD EASAGSGNAH SKAVATMAAE QGAAHVVISA QIEEEISQLD PEEAEMFLSE MGLEEAGLDR LIKAGYALLH LETYFTAGPK EARAWTIPAG THAPQAAGVI HGDFERGFIR AETIAYDDYV ALGGEQAAKE AGKMRAEGKS YVVKDGDVLH FLFNT
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