Gene Dshi_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0896 
Symbol 
ID5710586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp914230 
End bp915495 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content71% 
IMG OID641266806 
Producthypothetical protein 
Protein accessionYP_001532242 
Protein GI159043448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.08458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.380175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG CCTTCCTGAC CAACACGTCC ATCGAGGGGT TGCGCCCGCT CGGGACGGCG 
CCGCAGCGCT CCTACGAGCT GATCACCGGC ACGGTGCGGG CCGAGATCGG CGCGGCGCCG
GCGGCCCTTT TTGCCGAGCC GGTGGCGACG CAGTTCGGCG ACCGGTTCGA CTGGTACGCG
GCGGTGGAAG GCAAGGCGCA GCCCTTGGCC GACCTGCCCG AGCAGGACCG CGCACGGGCC
GAGGCGACGC TCGCGGAGCA GATCGCGGAG GTCCGCGCAC TTGCGGCGCG CTACAGCAGT
GCCGAGAGCG CCGAGGAGCA GCGGCTGGGC GAGGCGCTGG AGAATGCGCT GTCCTATCCC
GAGGACGGGG TGTTCGTGGT GTGGGGGCCG GATGGCGCGT TGCAGCCGGT TCTGGTGAAC
TGGGCCTGGG TGTCGGACAA GCAGGTGGTG GTGGAGGGCT CCTTGCGCGC GCCCGACGCG
CGACCCGCGC CGAAGCCCGC CCCACCGCCC GTGGGCACGG GCCCGGCAGG CGCCGCGGGG
GGCGCCGCGG CCACGGCGAC ATCCGAGCGG ATCTGGGCCG CGCCCCTCTG GCTGCTGTGG
CTCCTGGGTC TGTTGCTGGC CCTGCTGCTG GCGGCGATCG TCTGGCTAAT GGTGCCGGCC
TGCGGGATCA GGACGCCCTT CACCCTGTCC TATTGCGAAG CGGCGGCCCA GAGCGATGCG
GCCACCCGGC GCGGGCAGGT CCTGAAGGAC CGGATCGCGA TTCTGGAGCG GCAGATCGGC
ATCGCCGACC GGGCCTGCCA GCCCGACCCG AGGGACGGGC TGCCGATCCC GGACCTGCCG
GCCCTGGCCC AACGCCCGCC CGAGGCGCTG CCCGATATCG ACGCGCGCCG GTCCGAGGCC
GGTGCAGAAT TGGGCGATCT GACCTTCACC CTGGCCTGGG ACGGGCCGGA CGACCTCGAT
CTGTCGGTGA CCTGCCCGGC GGGGGTGACC GTGTCCTACC TGCGGCGCGA TGCCTGCAAC
GGGCAACTGG ACGTCGACAG CAATGTGGGC GCGCCGGTGG ACAAGCCGGT GGAGAACATC
TTCTTCACCG GGCCCCAGGG CGGGGTCTAC GAGATCCGCG TGCGGATGTA TTCCTCGCGC
TCCGGGGGGG GCGATACGCC CTTTCAGGTC CAGATCCGCG CGGCCGACAG GGTTGAAAAC
CTGACCGGGA TCGTTTCAGG TCAGAACAGG GACTGGCAGC AGTCCTACAA TTACGGGGGG
CAGTGA
 
Protein sequence
MFEAFLTNTS IEGLRPLGTA PQRSYELITG TVRAEIGAAP AALFAEPVAT QFGDRFDWYA 
AVEGKAQPLA DLPEQDRARA EATLAEQIAE VRALAARYSS AESAEEQRLG EALENALSYP
EDGVFVVWGP DGALQPVLVN WAWVSDKQVV VEGSLRAPDA RPAPKPAPPP VGTGPAGAAG
GAAATATSER IWAAPLWLLW LLGLLLALLL AAIVWLMVPA CGIRTPFTLS YCEAAAQSDA
ATRRGQVLKD RIAILERQIG IADRACQPDP RDGLPIPDLP ALAQRPPEAL PDIDARRSEA
GAELGDLTFT LAWDGPDDLD LSVTCPAGVT VSYLRRDACN GQLDVDSNVG APVDKPVENI
FFTGPQGGVY EIRVRMYSSR SGGGDTPFQV QIRAADRVEN LTGIVSGQNR DWQQSYNYGG
Q