| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0890 |
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| Symbol | |
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| ID | 5710580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 905581 |
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| End bp | 906573 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266800 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001532236 |
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| Protein GI | 159043442 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.506898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAA AACCGGACAC CGACGGGCTT GTCATCGTCA CCGAGGAAAT CTGCCAAAAG
GTCATCGACC GGGATCTGGC CTTCGCCGCC GTACGCGATG TGTTCGGCGC CATGGCGCGG
GGCGATGCCT ACAACTTCCC GGTGATCCGC GAGGCGATCG GGCACGAGGA TGCGCTTTAC
GGGTTCAAGT CCGGGTTCGA CAAGGCGGGC ATGGTGCTGG GCGTGAAGGC CGGGGGCTAT
TGGCCCAACA ACATGGCCAA GGGGATCATC AATCACCAGT CCACGGTGTT CCTGTTCGAC
CCCGATACCG GCAAGCTCAA GGCGCTGGTG GGGGGCAACT ACCTCACGGC GATCCGCACC
GCGGCCTCCT CGGCAGTGTC CATCGACCAG CTGGCGCGCA AGGATGCCAA GGTTCTGGGC
ATGGTCGGGG CGGGGCACCA GTCCACCTTC CAGCTGCGCG CGGCCGTCGA GCAGCGCGAT
TTCGAGAAGG TCGTCTGCTG GAACCCCCAT CCCGACATGA TCCCCAACCT CGGCAAGGTG
GCGGCCGAGA TCGGCATCCC CTTCGAGGCG GTCTCGCGCG AAGAGCTGGG CGCGCAGTCG
GATGTCATCA TCACCATCAC CTCCGCTTTC GAGCCGCTCA TCGAGGCGGG CTATATCAAG
CCGGGCACGC ATCTGGCCTG CATGGGCACC GACACCAAGG GCAAGCAGGA GGTCGCGGCA
GAGCTGGTGG CCAAGGCCAC GCTCTTTACC GACGAGGTGG CGCAATCCAC CACCATCGGC
GAGACCCAGC ATGCCATCGC CTCCGGCGCG ATCACACAGG ACGATGTCAC GCCCATCGGC
AAGGTGATCA ACGGCGACCA CCCGGGCCGG ACCTCCGATG ACGAGATCAC CTTGTTCGAC
GGGACCGGCG TCGGGTTGCA GGACCTGGCG GTCGCTGCCG TGGCCGCCGA GCAGGCGGTC
GCGACGGGGG CGGCCACGCG CGTCTCGCTC TGA
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| Protein sequence | MLQKPDTDGL VIVTEEICQK VIDRDLAFAA VRDVFGAMAR GDAYNFPVIR EAIGHEDALY
GFKSGFDKAG MVLGVKAGGY WPNNMAKGII NHQSTVFLFD PDTGKLKALV GGNYLTAIRT
AASSAVSIDQ LARKDAKVLG MVGAGHQSTF QLRAAVEQRD FEKVVCWNPH PDMIPNLGKV
AAEIGIPFEA VSREELGAQS DVIITITSAF EPLIEAGYIK PGTHLACMGT DTKGKQEVAA
ELVAKATLFT DEVAQSTTIG ETQHAIASGA ITQDDVTPIG KVINGDHPGR TSDDEITLFD
GTGVGLQDLA VAAVAAEQAV ATGAATRVSL
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