Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0887 |
Symbol | sgaA2 |
ID | 5710577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 902124 |
End bp | 903314 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266797 |
Product | serine--glyoxylate transaminase |
Protein accession | YP_001532233 |
Protein GI | 159043439 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.894708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATC AGAACCCGAT TTTCATCCCC GGCCCGACCA ACGTTCCCGA CCGCCTGCGG CGCGTGATGG ACATGCAGAC GCGGGACCAT CGCTCCCCGG CGTTCGGCGC GATGCTGCCC GAACTGTTCG ACGGCGTGCG CAAGGTCTTC AACACCAAGG ACGCCGCGAT CATCACCTTC CCGGCCAGCG GCACGGGCGG CTGGGAAGCC GCCGTCAGCA ACACCCTGTC GCCCGGCGAC ACGGTTCTGA TCGCCCGCTA CGGCATGTTC AGCCACCGCT GGATCGACCT GTGCCAGCGC CATGGCCTGA ATGTCGAGAT CATCGAATGC GCCTGGGGCA GCGGCGCGCC CGCCGACCTG TTCGCCGAGC GGCTGAAGGC CGACAAGGGT CACGAGATCA AGGCCGTCCT CGTCACCCAT AACGAAACCG CGACCGGCGT GCGGTCCGAC ATCGGGGCGG TGCGGCGCGG CATGGACAGT GCCGATCACC CGGCGATGCT GATGGTGGAC TGCGTGTCCT CGCTGGCCTC GATGCCCTTC GATTTCGACG GCTGGGGCGT GGATGTCGCG ATCACCGGCT CTCAGAAGGG ATTCATGCTG TTCACCGGGA TGTGCATCGT CGCCGTCAGC CAGAAGGCGC TGGAGCATCG CAAGACCGCG AAACTGCCGC GCACCTTCTT CAGCTTCGAC GACATGCTGG CGGCCAATGG CGCGGGCGGC TATCCCTACA CCCCGCCGAT CCAGTTGATG TTCGGGCTGC AGGAAAGCCT CAAGATGCTG TTCGAAGAGG GGCTGGAAAA TGTCTATGCG CGCCACTTCC GGCTGGCCGA GGGCGTGCGC CGCGCGGTCG ATGCCTGGGG CCTGCGCCTG TGTGCCGAGA GCGCGGATCT TTACTCCGAC ACGGTCAGCG CCATCTATGT GCCCAAGGGG TTCGACAGCA ACGCGCTGAC CCAGCATGCC TATGATGCCT ATGACATCTC CTTCGGCGTG GGCCTGGGGG AGATGAACGG GAGGGCCTTC CGCATCGGGC ATCTGGGCGC GTTGACGGAT GTGACCATGC TGTCGGGTCT TGCGACCATC GAGATGGCCA TGGCCGATCT CGACTACCCC ATCGAGCTGG GCTCCGGCGT GGCCGCGGCG CAGCAATTCT ACCGGACAAC GGCGGGCGCA AGCCTCGCCA AAGCAGCGTG A
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Protein sequence | MFDQNPIFIP GPTNVPDRLR RVMDMQTRDH RSPAFGAMLP ELFDGVRKVF NTKDAAIITF PASGTGGWEA AVSNTLSPGD TVLIARYGMF SHRWIDLCQR HGLNVEIIEC AWGSGAPADL FAERLKADKG HEIKAVLVTH NETATGVRSD IGAVRRGMDS ADHPAMLMVD CVSSLASMPF DFDGWGVDVA ITGSQKGFML FTGMCIVAVS QKALEHRKTA KLPRTFFSFD DMLAANGAGG YPYTPPIQLM FGLQESLKML FEEGLENVYA RHFRLAEGVR RAVDAWGLRL CAESADLYSD TVSAIYVPKG FDSNALTQHA YDAYDISFGV GLGEMNGRAF RIGHLGALTD VTMLSGLATI EMAMADLDYP IELGSGVAAA QQFYRTTAGA SLAKAA
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