Gene Dshi_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0820 
Symbol 
ID5711446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp824267 
End bp825034 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID641266729 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_001532166 
Protein GI159043372 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA CCGTGATCCA TGGCGCGGCC ACGGAGGCGC CGCCGCTTCT GATCGTGCAC 
GGGCTCTTCG GCTCGGCGAA GAACTGGGGC GCGATCGCCA AGCGGATGGC GCAGCACCGG
CAGGTGTTGG CGGTGGATCT GCGCAATCAC GGCGACAGCC CCCATACGCA GAGCCACAGC
TACCCCGACC TCGCCGCCGA TCTGGCCGAG GTGATCGCGG CCCATGGCGG GCGCGCGGAT
GTGCTGGGCC ATTCCATGGG CGGCAAGGCG GCGATGGTGC TGGCGCTCAG CCAGCCCGAG
ATGGTTGCGC GCCTGCTGGT CGCGGATATC GCGCCGGTGA CCTATGACCG GACGCAAGTT
GGGCTGATCG ACGCGATGGA GGGGGTGGAC CTGTCGGCGG TGACGAAGCG CTCGGACGCG
GATGCCGCAC TGGCGGCCGA CGTGCCCGAT GCGCCGACGC GCGCCTTCCT GACGCAATCG
CTGGACCTGC GGGCCGAGGG CGGGCCGCGC TGGCGGCTGA ACCTCGCCAC CCTGCGCCGC
GACATGCCGC GGATCATGGG GTTTCCCGAG ATCGACGGGC GCTATACCGG GCCGACCCTG
TTCCTGCGCG GGGGCGCGTC GGATTACGTC CTGCCCGCCC ATGGAGCGGA GATCGAGCGG
CTGTTCCCCG GGGCCGACCG GGACGCGATT CCGGACGTGG GCCATTGGCT CCATGCGGAG
GCGCCAGGGC CGTTCATCGC GCGGCTGACA GACTTCCTCG ACGCCTGA
 
Protein sequence
MLNTVIHGAA TEAPPLLIVH GLFGSAKNWG AIAKRMAQHR QVLAVDLRNH GDSPHTQSHS 
YPDLAADLAE VIAAHGGRAD VLGHSMGGKA AMVLALSQPE MVARLLVADI APVTYDRTQV
GLIDAMEGVD LSAVTKRSDA DAALAADVPD APTRAFLTQS LDLRAEGGPR WRLNLATLRR
DMPRIMGFPE IDGRYTGPTL FLRGGASDYV LPAHGAEIER LFPGADRDAI PDVGHWLHAE
APGPFIARLT DFLDA