Gene Dshi_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0794 
SymbolhisB 
ID5711230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp801568 
End bp802155 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID641266703 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_001532140 
Protein GI159043346 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0399924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.805329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG CCACCATCAC CCGCAAGACC GCCGAAACCG ACATCTCGGT CGAAATCGAT 
CTCGATGGGA CCGGGGTCTA TGACAACCGC ACCGGGGTCG GGTTTTTCGA CCACATGCTG
GACCAGCTCA GCCGCCACGC GCTGATCGAC ATGACCGTGC GCTGCGACGG GGATCTGCAT
ATCGACGACC ACCACACGGT GGAGGATGTG GGTATCGCCC TGGGTCAGGC CCTGGCCGAG
GCGGTCGGCG ACAAGCGCGG GATCGTGCGC TACGGGTCCT GCCTGCTGCC GATGGACGAC
GCGCTGGTGC GCGCCGCGCT CGACATCTCT GGACGGCCTT ATCTGGTGTG GGATGTGGCC
CTCCCCACCG CCAAGATCGG CACCTTCGAT ACCGAGCTGG TGCGCGAGTT CTTCCAGGCG
CTCGCGACCC ATGGCGGGCT GACCCTGCAC GTCACCAGGC TGGCCGGGAT CAACAGCCAC
CACATCGCCG AAGCCGCGTT CAAATCCGTG GCCCGCGCCC TGCGCGCAGC ACTTGAGACC
GACCCGCGCA AGGCCAATGC CATCCCCTCC ACCAAGGGGT CGCTCTGA
 
Protein sequence
MRRATITRKT AETDISVEID LDGTGVYDNR TGVGFFDHML DQLSRHALID MTVRCDGDLH 
IDDHHTVEDV GIALGQALAE AVGDKRGIVR YGSCLLPMDD ALVRAALDIS GRPYLVWDVA
LPTAKIGTFD TELVREFFQA LATHGGLTLH VTRLAGINSH HIAEAAFKSV ARALRAALET
DPRKANAIPS TKGSL